Mammalian Genome

, Volume 13, Issue 1, pp 50–57

CAN—a pan-carnivore SINE family

Authors

  • Nikita S. Vassetzky
    • Laboratory of Eukaryotic Genomes Evolution, Engelhardt Institute of Molecular Biology, Russian Academy of Sciences, 32 Vavilov St., Moscow, 119991 Russia
  • Dmitri A. Kramerov
    • Laboratory of Eukaryotic Genomes Evolution, Engelhardt Institute of Molecular Biology, Russian Academy of Sciences, 32 Vavilov St., Moscow, 119991 Russia
Article

DOI: 10.1007/s00335-001-2111-1

Cite this article as:
Vassetzky, N.S. & Kramerov, D.A. Mammalian Genome (2002) 13: 50. doi:10.1007/s00335-001-2111-1

Abstract

Short retroposons or short interspersed elements (SINEs) constituting 5–10% genome have been isolated from various organisms. CAN SINEs initially found in American mink were named after dogs (Canis), and the range of their distribution in the genomes of carnivores and mammals in general remained topical. Here we demonstrate CAN sequences in representatives of all carnivore families, but not beyond carnivores, on the basis of sequence bank search and genomic PCR. Analysis of their distribution supports division of carnivores into caniform (dogs, mustelids, raccoons, bears, and pinnipeds) and feliform (cats, civets, and hyenas) lineages. CAN structure is considered in the context of their function and evolution.

Copyright information

© Springer-Verlag New York Inc. 2002