Skip to main content
Log in

Influence of Hydrological Pulse on Bacterial Growth and DOC Uptake in a Clear-Water Amazonian Lake

  • Published:
Microbial Ecology Aims and scope Submit manuscript

Abstract

This study was conducted to evaluate: (1) the bacterial growth and the dissolved organic carbon (DOC) uptake in an Amazonian lake (Lake Batata) at high-water and low-water periods of the flood pulse; (2) the influence of nitrogen and phosphorus (NP) additions on bacterial growth and DOC uptake in Lake Batata at two flood pulse periods; and (3) the bioavailability of the main DOC sources in Lake Batata. Lake Batata is a typical clear-water Amazonian lake, located in the watershed of Trombetas River, Central Amazon, Brazil. Bacterial batch cultures were set up with 90% 0.2-μm filtered water and 10% inoculum from Lake Batata. N-NH4NO3 and P-KH2PO4, with final concentrations of 50 and 5 μM, respectively, were added to the cultures, except for controls. Extra sources of DOC (e.g., algal lysate, plant leachates) were added to constitute six distinct treatments. Bacterial response was measured by maximum bacterial abundance and rates of bacterial production, respiration, DOC uptake, and bacterial growth efficiency (BGE). Bacterial growth and DOC uptake were higher in NP treatments than in controls, indicating a consistent nutrient limitation in Lake Batata. The composition of DOC also seems to be an important regulating factor of bacterial growth in Lake Batata. Seasonally, bacterial growth and DOC bioavailability were higher at low-water period, when the phytoplankton is a significant extra source of DOC, than at high-water period, when the forest is the main source of DOC. DOC bioavailability was better estimated based on the diversity and the diagenetic stage of carbon compounds than on single classes of labile compounds. Changes in BGE were better related to CNP stoichiometry in the water, and the “excess” of organic substrates was oxidized in catabolism, despite the quality of these compounds for bacterial growth. Finally, we conclude that bacterial growth and DOC uptake vary throughout the flood pulse in clear-water Amazonian ecosystems as a result of changes in nutrient concentration and in DOC composition.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Figure 1
Figure 2

Similar content being viewed by others

References

  1. Adams, RP (1995) Identification of Essential Oil Components by Gas Chromatography/Mass Spectroscopy. Allured Publishing Corporation, Carol Stream, IL, USA, p 469

  2. Aitkenhead-Peterson, JA, McDowell, WH, Neff, JC (2003) Sources, production and regulation of allochthonous dissolved organic matter inputs. In: Findlay, S, Sinsabaugh, RE (Eds.) Aquatic Ecosystems: Interactivity of Dissolved Organic Matter. Academic Press, Elsevier, USA, pp 25–70

  3. Amon, RMW, Benner, R (1996) Bacterial utilization of different size classes of dissolved organic matter. Limnol Oceanogr 41: 41–51

    Article  CAS  Google Scholar 

  4. Anesio, AM, Abreu, PC, Esteves, FA (1997) Influence of the hydrological cycle on the bacterioplankton of an impacted clear Amazonian lake. Microb Ecol 34: 66–73

    Article  PubMed  Google Scholar 

  5. Azam, F, Fenchel, T, Field, JG, Gray, JS, Meyer-Reil, LA, Thingstad, F (1983) The ecological role of water column microbes in the sea. Mar Ecol Prog Ser 10: 257–263

    Article  Google Scholar 

  6. Benner, R, Opsahl, S, Chin-Leo, G, Richey, JE, Forsberg, BR (1995) Bacterial carbon metabolism in the Amazon River system. Limnol Oceanogr 40: 1262–1270

    Google Scholar 

  7. Bozelli, R, Esteves, FA, Roland, R (2000) Lago Batata: impacto e recuperação de um ecossistema amazônico, IB-UFRJ/SBL, Rio de Janeiro, RJ, p 342

  8. Budzikiewicz, H, Wilson, JM, Djerassi, C (1963) Mass spectrometry in structural and stereochemical problems. XXXII. Pentacyclic triterpenes. J Am Chem Soc 85: 3688–3699

    Article  CAS  Google Scholar 

  9. Bunte, C, Simon, M (1999) Bacterioplankton turnover of dissolved free monosaccharides in a mesotrophic lake. Limnol Oceanogr 44:1862–1870

    CAS  Google Scholar 

  10. Bussmann, I (1999) Bacterial utilization of humic substances from the Arctic Ocean. Aquat Microb Ecol 19: 37–45

    Article  Google Scholar 

  11. Carpenter, SR (1999) Microcosm experiments have limited relevance for community and ecosystem ecology: reply. Ecology 80: 1085–1088

    Article  Google Scholar 

  12. Cimbleris, ACP, Kalff, J (1998) Planktonic bacterial respiration as a function of C:N:P ratios across temperate lakes. Hydrobiologia 384: 89–100

    Article  Google Scholar 

  13. Cotner, JB, Biddanda, BA (2002) Small players, large role: microbial influence on biogeochemical processes in pelagic aquatic ecosystems. Ecosystems 5: 105–121

    Article  CAS  Google Scholar 

  14. del Giorgio, PA, Cole, JJ (1998) Bacterial growth efficiency in aquatic systems. Annu Rev Ecol Syst 29: 503–541

    Article  Google Scholar 

  15. del Giorgio, PA, Cole, JJ (2000) Bacterial energetics and growth efficiency. In: Kirchman, DL (Ed.) Microbial Ecology of the Oceans. Wiley-Liss, USA, pp 289–325

    Google Scholar 

  16. del Giorgio, PA, Davies, J (2003) Patterns in dissolved organic matter liability and consumption across aquatic ecosystems. In: Findlay, S, Sinsabaugh, RL (Eds.) Aquatic Ecosystems: Interactivity of Dissolved Organic Matter. Academic Press, Elsevier, USA, pp 399–424

  17. Drenner, RW, Mazumder, A (1999) Microcosm experiments hale limited relevance for community and ecosystem ecology: comment. Ecology 80: 1081–1085

    Google Scholar 

  18. Egli, T (1996) The ecological and physiological significance of the growth of heterotrophic microorganisms with mixtures of substrates. In: Jones, JG (Ed.) Advances in Microbial Ecology, vol. 14. Plenum, New York, pp 305–386

    Google Scholar 

  19. Fagerbakke, K, Heldal, M, Norland, S (1996) Content of carbon, nitrogen, oxygen, sulfur and phosphorus in native aquatic and cultured bacteria. Aquat Microb Ecol 10: 15–27

    Article  Google Scholar 

  20. Farjalla, VF, Faria, BM, Esteves, FA (2002) The relationship between DOC and planktonic bacteria in tropical coastal lagoons. Arch Hydrobiol 156: 97–119

    Article  Google Scholar 

  21. Farjalla, VF, Esteves, FA, Bozelli, RL, Roland, F (2002) Nutrient limitation of bacterial production in clear-water Amazonian ecosystems. Hydrobiologia 489: 197–205

    Article  CAS  Google Scholar 

  22. Fenchel, T, King, GM, Blackburn, TH (1998) Bacterial Biogeochemistry: The Ecophysiology of Mineral Cycling, 2nd edition. Academic Press, UK p 307

    Google Scholar 

  23. Findlay, S, Sinsabaugh, RL (2003) Aquatic Ecosystems: Interactivity of Dissolved Organic matter. Academic Press, Elsevier, USA, p 512

  24. Fisher, TR (1979) Plankton and primary production in aquatic systems of the central Amazon basin. Comp Biochem Physiol 62:31–38

    Article  Google Scholar 

  25. Fraser, LH, Keddy, P (1997) The role of experimental microcosms in ecological research. TREE 12: 478–481

    Google Scholar 

  26. Golterman, HL, Clymo, RS, Ohnstad, MAM (1978) Methods of Physical and Chemical Analysis of Fresh Water. Blackwell, Oxford, p 214

    Google Scholar 

  27. Grace, J, Malhi, Y (2002) Carbon dioxide goes with the flow. Nature 416: 594–595

    Article  PubMed  CAS  Google Scholar 

  28. Hedges, JI, Cowie, GL, Richey, JE, Quay, PD, Benner, R, Strom, M, Forsberg, BR (1994) Origins and processing of organic matter in the Amazon River as indicated by carbohydrates and amino acids. Limnol Oceanogr 39: 743–761

    CAS  Google Scholar 

  29. Hobbie, JE, Daley, RJ, Jasper, S (1977) Use of nucleopore filters for counting bacteria by fluorescence microscopy. Appl Environ Microbiol 33: 1225–1228

    PubMed  CAS  Google Scholar 

  30. Hunt, AP, Parry, JD, Hamilton-Taylor, J (2000) Further evidence of elemental composition as an indicator of the bioavailability of humic substances to bacteria. Limnol Oceanogr 45: 237–241

    Article  CAS  Google Scholar 

  31. Jonsson, A, Meili, M, Bergström, A-K, Jansson, M (2001) Whole-water mineralization of allochthonous and autochthonous organic carbon in a large humic lake (Örtäsket, N. Sweden). Limnol Oceanogr 46: 1691–1700

    Article  CAS  Google Scholar 

  32. Junk, WJ, Bayley, PB, Sparks, RE (1989) The flood pulse concept in river–floodplain system. In: Dodge, DP (Ed.) Proceedings of the International Large Rivers Symposium (LARS). Can Spec Publ Fish Aquat Sci 106: 110–127

  33. Junk, WJ (1997) General aspects of floodplain ecology with special reference to amazonian floodplains. In: Junk, WJ (Ed.) The Central Amazon Floodplain, Ecological Studies, vol. 126. Springer-Verlag, Berlin

    Google Scholar 

  34. Kaplan, LA, Gremm, TJ (1997) Dissolved carbohydrates in stream water determinate by HPLC and pulsed amperometric detection. Limnol Oceanogr 42: 385–393

    Google Scholar 

  35. Kaplan, LA, Newbold, JD (2003) The role of monomers in stream ecosystem metabolism. In: Findlay, S, Sinsabaugh, RE (Eds.) Aquatic Ecosystems: Interactivity of Dissolved Organic Matter. Academic Press, Elsevier, USA, pp 97–119

  36. Kirchman, DL (2000) Uptake and regeneration of inorganic nutrients by marine heterotrophic bacteria. In: Kirchman, DL (Ed.) Microbial Ecology of the Oceans. Wiley-Liss, USA, pp 261–288

    Google Scholar 

  37. Mackereth, FJH, Heron, J, Talling, JF (1978) Water analysis: some revised methods for limnologists. Freshwater Biological Association, Scientific Publication No. 36, Cumbria

  38. Montserrat-Sala, M, Peters, F, Gasol, JM, Pedrós-Alió , C, Marrasé, D, Vaqué, D (2002) Seasonal and spatial variations in the nutrient limitation of bacterioplankton growth in the northwestern Mediterranean. Aquat Microb Ecol 27: 47–56

    Article  Google Scholar 

  39. Nusch, EA, Palme, G (1975) Biologische methoden für die praxis der gewässeruntersuchung. GWF-Wasser/Abwasser 116: 562–565

    Google Scholar 

  40. Panosso, RF, Muehe, D, Esteves, FA (1995) Morphological characteristics of an Amazon flood-plain lake (Lake Batata, Pará State, Brazil). Amazoniana 13: 245–258

    Google Scholar 

  41. Philp, RP (1985) Fossil fuel biomarkers. Application and Spectra. Elsevier, Amsterdam

    Google Scholar 

  42. Rich, J, Ducklow, HW, Kirchman, DL (1996) Concentrations and uptake of neutral monossaccharides along 140°W in the equatorial Pacific: contribution of glucose to heterotrophic bacterial activity and the DOM-flux. Limnol Oceanogr 41: 943–948

    Article  Google Scholar 

  43. Richey, JE, Melack, JM, Aufdenkampe, AK, Ballester, VM, Hess, LL (2002) Outgassing from Amazonian rivers and wetlands as a large tropical source of atmospheric CO2. Nature 416: 617–620

    Article  PubMed  CAS  Google Scholar 

  44. Roland, F, Esteves, FA (1993) Dynamics of phosphorus, carbon and nitrogen in an Amazonian lake impacted with bauxite tailing (Batata Lake, Pará, Brazil). Verh Int Verein Limnol 25: 925–930

    CAS  Google Scholar 

  45. Shiojima, K, Arai, Y, Masuda, K, Takase, Y, Ageta, T, Ageta, H (1992) Mass spectra of pentacyclic triterpenoids. Chem Pharm Bull 40: 1683–1690

    CAS  Google Scholar 

  46. Sioli, H (1984) The Amazon. Dr W Junk Publishers, Dordrecht, The Netherlands, p 763

    Google Scholar 

  47. Skoog, A, Biddanda, B, Benner, R (1999) Bacterial utilization of dissolved glucose in the upper water column of the Gulf of Mexico. Limnol Oceanogr 44: 1625–1633

    CAS  Google Scholar 

  48. Sun, L, Perdue, EM, Meyer, JL, Weis, J (1997) Use of elemental composition to predict bioavailability of dissolved organic matter in a Georgia river. Limnol Oceanogr 42: 714–721

    Article  CAS  Google Scholar 

  49. Søndergaard, M, Theil-Nielsen, J (1997) Bacterial growth efficiency in lakewater cultures. Aquat Microb Ecol 12: 115–122

    Article  Google Scholar 

  50. Søndergaard, M, Middleboe, M (1995) A cross-system analysis of labile dissolved organic carbon. Mar Ecol Prog Ser 118: 283–294

    Article  Google Scholar 

  51. Theil-Nielsen, J, Søndergaard, M (1998) Bacterial carbon biomass calculated from biovolumes. Arch Hydrobiol 141: 195–207

    CAS  Google Scholar 

  52. Thingstad, TF, Hagström, Å, Rassoulzadegan, F (1997) Export of degradable DOC from oligotrophic surface waters: caused by a malfunctioning of microbial loop? Limnol Oceanogr 42: 398–404

    Article  CAS  Google Scholar 

  53. Waichman, AV (1996) Autotrophic carbon sources for heterotrophic bacterioplankton in a floodplain lake of central Amazon. Hydrobiologia 341: 27–36

    Article  CAS  Google Scholar 

  54. Weiss, M, Simon, M (1999) Consumption of labile dissolved organic matter by limnetic bacterioplankton: the relative significance of amino acids and carbohydrates. Aquat Microb Ecol 17: 1–12

    Article  Google Scholar 

Download references

Acknowledgments

The authors are particularly grateful to A.M. Amado and Dr. A.S. Furtado for criticism of the manuscript, to Dr. D. Giroldo for carbohydrate analyses, and to Dra. D.S.D. Araújo for correcting the English. CNPq and Mineração Rio do Norte supported this research. V.F. Farjalla is particularly grateful to FAPERJ Institution for a Ph.D. scholarship.

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to Vinicius F. Farjalla.

Rights and permissions

Reprints and permissions

About this article

Cite this article

Farjalla, V.F., Azevedo, D.A., Esteves, F.A. et al. Influence of Hydrological Pulse on Bacterial Growth and DOC Uptake in a Clear-Water Amazonian Lake. Microb Ecol 52, 334–344 (2006). https://doi.org/10.1007/s00248-006-9021-4

Download citation

  • Received:

  • Accepted:

  • Published:

  • Issue Date:

  • DOI: https://doi.org/10.1007/s00248-006-9021-4

Keywords

Navigation