Theoretical and Applied Genetics

, Volume 100, Issue 3, pp 447–453

Genetic mapping of hypervariable minisatellite sequences in rice (Oryza sativa L.)

  • J. P. Gustafson
  • M. Yano
Original Article

DOI: 10.1007/s001220050058

Cite this article as:
Gustafson, J. & Yano, M. Theor Appl Genet (2000) 100: 447. doi:10.1007/s001220050058


Minisatellites, or DNA fingerprinting sequences, have been utilized in animal linkage studies for several years but have not been used as markers for plant genome mapping. In animal genome mapping they have resulted in limited success because they are evenly dispersed in some species but are often clustered near telomeric regions, as observed on human chromosomes. The purpose of the present study was to generate DNA fingerprints utilizing several rice-derived minisatellites containing different core sequences and numbers of repeat units, followed by assessing their potential for use as genetic markers when mapped to a rice recombinant inbred line (RIL) population. Sites of segregating minisatellite loci were mapped onto 11 of the 12 rice RIL linkage maps. The implications for the use of rice minisatellite core sequences as genetic markers on linkage maps in rice are discussed.

Key words Linkage mapsMinisatellitesDNA fingerprintingRice

Copyright information

© Springer-Verlag Berlin Heidelberg 2000

Authors and Affiliations

  • J. P. Gustafson
    • 1
  • M. Yano
    • 2
  1. 1.United States Department of Agriculture, Agricultural Research Service, Plant Genetics Research Unit, and Plant Science, Unit, University of Missouri, Columbia, Missouri 65211 USAUS
  2. 2.Rice Genome Project (RGP), National Institute of Agrobiological Resources, 2-1-2 Kannondai, Tsukuba, Ibaraki 305, JapanJP