Theoretical and Applied Genetics

, Volume 120, Issue 4, pp 721–734

Genetic variation at bx1 controls DIMBOA content in maize

  • Ana Butrón
  • Y. C. Chen
  • G. E. Rottinghaus
  • M. D. McMullen
Original Paper

DOI: 10.1007/s00122-009-1192-1

Cite this article as:
Butrón, A., Chen, Y.C., Rottinghaus, G.E. et al. Theor Appl Genet (2010) 120: 721. doi:10.1007/s00122-009-1192-1

Abstract

The main hydroxamic acid in maize (Zea mays L.) is 2-4-dihydroxy-7-methoxy-1,4-benzoxazin-3-one (DIMBOA). DIMBOA confers resistance to leaf-feeding by several corn borers. Most genes involved in the DIMBOA metabolic pathway are located on the short arm of chromosome 4, and quantitative trait loci (QTLs) involved in maize resistance to leaf-feeding by corn borers have been localized to that region. However, the low resolution of QTL linkage mapping does not allow convincing proof that genetic variation at bx loci was responsible for the variability for resistance. This study addressed the following objectives: to determine the QTLs involved in DIMBOA synthesis across genetically divergent maize inbreds using eight RIL families from the nested association mapping population, to check the stability of QTLs for DIMBOA content across years by evaluating two of those RIL families in 2 years, and to test the involvement of bx1 by performing association mapping with a panel of 281 diverse inbred lines. QTLs were stable across different environments. A genetic model including eight markers explained approximately 34% of phenotypic variability across eight RIL families and the position of the largest QTL co-localizes with the majority of structural genes of the DIMBOA pathway. Candidate association analysis determined that sequence polymorphisms at bx1 greatly affects variation of DIMBOA content in a diverse panel of maize inbreds, but the specific causal polymorphism or polymorphisms responsible for the QTL detected in the region 4.01 were not identified. This result may be because the causal polymorphism(s) were not sequenced, identity is masked by linkage disequilibrium, adjustments for population structure reduce significance of causal polymorphisms or multiple causal polymorphisms affecting bx1 segregate among inbred lines.

Supplementary material

122_2009_1192_MOESM1_ESM.pdf (73 kb)
Supplementary material 1 (PDF 72.9 kb)

Copyright information

© US Government 2009

Authors and Affiliations

  • Ana Butrón
    • 1
  • Y. C. Chen
    • 2
  • G. E. Rottinghaus
    • 2
  • M. D. McMullen
    • 3
  1. 1.Misión Biológica de Galicia (CSIC)PontevedraSpain
  2. 2.Veterinary Medical Diagnostic LaboratoryUniversity of MissouriColumbiaUSA
  3. 3.Plant Genetics Research Unit, USDA-Agricultural Research Service and the Division of Plant SciencesUniversity of MissouriColumbiaUSA