Abstract
The Fitzroy River delivers large amounts of nutrients and fine sediments to Keppel Bay (contiguous with the Great Barrier Reef Lagoon) during intermittent flow events. This study explores sources, forms and transformations of nutrients in Keppel Bay, and develops a functional process zonation that integrates seabed geochemistry and water column nutrient characteristics which are controlled by suspended sediment. The water column and seabed properties were investigated over two dry seasons, with supplementary core incubations taken to measure carbon decomposition rates and nutrient fluxes. Keppel Bay can be divided into three zones, the: zone of maximum resuspension (ZMR); coastal transitional zone (CTZ); and blue water zone (BWZ). Mineralisation of predominantly terrestrial organic matter occurs in the ZMR where nutrient uptake by phytoplankton is light limited. The CTZ and BWZ had higher light penetration and phytoplankton growth was likely limited by N and P, respectively. The identified zones conform to the bathymetry and hydrodynamic characteristics of the bay, allowing for the development of an integrated conceptual model accounting for the benthic and pelagic biogeochemical processes. Recognition of these different zones shows that considerable variation in benthic and water column properties is possible within a small system with the bathymetric and hydrodynamic characteristics of the fluidized bed reactor.
References
Abril G, Riou SA, Etcheber H et al (2000) Transient, tidal time-scale, nitrogen transformations in an estuarine turbidity maximum-fluid mud system (The Gironde, South-west France). Estuar Coast Shelf Sci 50:703–715
Agawin NS, Duarte CM, Agusti S et al (2004) Effect of N:P ratios on the response of Mediterranean picophytoplankton to experimental nutrient. Aquat Microb Ecol 34:57–67
Aller RC (1998) Mobile deltaic and continental shelf muds as suboxic, fluidized bed reactors. Mar Chem 61:143–155
Aller RC, Michalopoulos P (1999) Tropical, mobile mud belts as global diagenetic reactors. In: Armannsson H (ed) Geochemistry of the Earth’s Surface. Balkema, Rotterdam, pp 289–292
Aller RC, Mackin JE, Cox RT (1986) Diagenesis of Fe and S in Amazon inner shelf muds: apparent dominance of Fe reduction and implications for the genesis of ironstones. Cont Shelf Res 6:263–289
Aller RC, Blair NE, Xai Q et al (1996) Remineralisation rates, recycling, and storage of carbon in Amazon shelf sediments. Cont Shelf Res 16:753–786
Aller RC, Hannides A, Heilbrun C et al (2004) Coupling of early diagenetic processes and sedimentary dynamics in tropical shelf environments: the Gulf of Papua deltaic complex. Cont Shelf Res 24:2455–2486
Alongi D (1995) Decomposition and recycling of organic matter in muds of the Gulf of Papua, northern Coral Sea. Cont Shelf Res 15:1319–1337
Anderson LA (1995) On the hydrogen and oxygen content of marine phytoplankton. Deep Sea Res I 42:1675–1680
Anonymous (1998) In: Clesceri LS, Greenberg AE, Trussell, RR (ed) Standard methods for the examination of water and waste water, 20th edn, APHA-AWWA-WPCF, Washington
Bell PRF, Elmetri I, Uwins PJR (1999) Nitrogen fixation of Trichodesmium spp. in the Central and Northern Great Barrier Reef Lagoon: relative importance of the fixed-nitrogen load. Mar Ecol Prog Ser 186:119–126
Bell PFR, Uwins PJR, Elmetri I et al (2005) Laboratory culture studies of Trichodesmium isolated from the Great Barrier Reef Lagoon, Australia. Hydrobiologia 532:9–21
Bird MI, Brunskill GJ, Chivas AR (1995) Carbon-isotope composition of sediments from the Gulf of Papua. Geo-Mar Lett 15:153–159
Boynton WR, Garber JH, Summers R et al (1995) Inputs, transformations, and transport of nitrogen and phosphorus in Chesapeake Bay and selected tributaries. Estuaries 18(18):285–314
Brooke B, Ryan D, Pietsch T et al (2008) Influence of climate fluctuations and changes in catchment land use on Late Holocene and modern beach-ridge sedimentation on a tropical macrotidal coast: Keppel Bay, Queensland, Australia. Mar Geol 251:195–208
Camacho-Ibar VF, Carriquiry JD, Smith SV (2003) Non-conservative P and N fluxes and net ecosystem production in San Quintin Bay, Mexico. Estuaries 26(5):1220–1237
Depetris PJ, Paolini JE (1991) Biogeochemical aspects of South American rivers: the Parana and the Orinoco. In: Degens ET, Kempe S, Richey JE (eds) Biogeochemistry of major world rivers, SCOPE 42. Wiley, Chichester, pp 105–125
Devlin MJ, Brodie J (2005) Terrestrial discharge into the Great Barrier Reef Lagoon: nutrient behaviour in coastal waters. Mar Pollut Bull 51:9–22
Donald KM, Scanlan DJ, Carr NG et al (1997) Comparative phosphorus nutrition of the marine cyanobacterium Synechococcus WH7803 and the marine diatom Thalassiosira weissflogii. J Plankton Res 19:1793–1813
Douglas G, Ford P, Palmer MR (2006) Fitzroy River Basin, Queensland, Australia. I. Identification of sediment sources in impoundments and flood events. Environ Chem 3(5):364–376
Eyre B (1993) Nutrients in the sediments of a tropical north-eastern Australian estuary, catchment and nearshore coastal zone. Aust J Mar Freshwat Res 44:845–866
Eyre B (1994) Nutrient biogeochemistry in the tropical Moresby river estuary system North Queensland, Australia. Estuar Coast Shelf Sci 39:15–31
Eyre B (1998) Transport, retention and transformation of material in Australian estuaries. Estuaries 21:540–551
Eyre B (2000) Regional evaluation of nutrient transformation and phytoplankton growth in nine river-dominated sub-tropical east Australian estuaries. Mar Ecol Prog Ser 205:61–83
Eyre B, Balls PW (1999) A comparative study of nutrient processes along a salinity gradient of tropical and temperate estuaries. Estuaries 22:313–326
Eyre B, Ferguson AJP (2002) Sediment biogeochemical indicators for defining sustainable nutrient loads to coastal ecosystems. In: Proceedings of coast to coast 2002—“Source to Sea”. Tweed Heads, New South Wales, pp 101–104
Eyre BD, McKee L (2002) Carbon, nitrogen and phosphorus budgets for a shallow sub-tropical coastal embayment (Moreton Bay, Australia). Limnol Oceanogr 47:1043–1055
Fabricius KE, De’Ath G (2004) Identifying ecological change and its causes: a case study on coral reefs. Ecol Appl 14:1448–1465
Ferguson A, Eyre B, Gay J et al (2007) Benthic metabolism and nitrogen cycling in a sub-tropical coastal embayment: spatial and seasonal variation and controlling factors. Aquat Microb Ecol 48:175–195
Flemming BW (2002) Geographic distribution of muddy coasts. In: Healy T, Wang Y, Healy JA (eds) Muddy coasts of the World; Processes, deposits and functions. Proceedings in Marine Science vol 4. Amsterdam, Elsevier, pp 99–202
Folk RL, Andrews PB, Lewis DW (1970) Detrital sedimentary rock classification and nomenclature for use in New Zealand. NZ J Geol Geophys 13:937–968
Ford PW, Tillman P, Robson BJ et al (2005) Organic carbon deliveries and their flow related dynamics in the Fitzroy estuary. Mar Pollut Bull 51:119–127
Froelich PN (1988) Kinetic control of dissolved phosphate in natural rivers and estuaries: a primer on the phosphate buffer mechanism. Limnol Oceanogr 33:649–668
Fukuda R, Ogawa H, Nagata T et al (1998) Direct determination of carbon and nitrogen contents of natural bacterial assemblages in marine environments. Appl Environ Microbiol 64(9):3352–3358
Fuller NJ, West NJ, Marie D et al (2005) Dynamics of community structure and phosphate status of picocyanobacterial populations in the Gulf of Aqaba, Red Sea. Limnol Oceanogr 50:363–375
Furnas M (2003) Catchments and corals. Australian Institute of Marine Science, Townsville, Queensland
Furnas MJ, Brodie J (1996) Current status of nutrient levels and other water quality parameters in the Great Barrier Reef. In: Hunter HM, Eyles MAG, Rayment GE (eds) Downstream effects of land use. Queensland Department of Natural Resources, Brisbane, pp 9–21
Furnas M, Mitchell A, Skuza M et al (2005) In the other 90%: phytoplankton responses to enhanced nutrient availability in the Great Barrier Reef. Mar Pollut Bull 51:253–265
Gagan MK, Sandstrom MW, Chivas AR (1987) Restricted terrestrial carbon input to the continental shelf during Cyclone Winifred: implications for terrestrial runoff to the Great Barrier Reef Province. Coral Reefs 6:113–119
Glibert PM, Bronk DA (1994) Release of dissolved organic nitrogen by marine diazotrophic cyanobacterium, Trichdesmium spp. Appl Environ Microbiol 60:3996–4000
Goni MA, Cathey MW, Kim YH et al (2005) Fluxes and sources of suspended organic matter in an estuarine turbidity maximum region during low discharge condition. Estuar Coast Shelf Sci 63:683–700
Hamilton D (1979) The high energy, sand and mud regime of the Severn Estuary, S.W. Britain. In: Severns RT (ed) Tidal power and estuary management. Proceedings of the 30th symposium of the Colston Research Society. University of Bristol, UK
Hedges JI, Keil RG (1995) Sedimentary organic matter preservation: an assessment and speculative synthesis. Mar Chem 49:81–115
Holtvoeth J, Kolonic S, Wagner T (2005) Soil organic matter as an important contributor to late Quaternary sediments of the tropical West African continental margin. Geochim Cosmochim Acta 69(8):2031–2041
Hosomi M, Sudo R (1986) Simultaneous determination of total nitrogen and total phosphorus in freshwater samples using persulfate digestion. Int J Environ Stud 27:267–275
Jahnke RA (1996) The global flux of particulate organic carbon: areal distribution and magnitude. Global Biogeochem Cycles 10:71–88
Joint IR (1986) Physiological ecology of pico-phytoplankton in various oceanographic provinces. Can Bull Fish Aquat Sci 214:287–309
Karl DM, Bidigare RR, Letelier RM (2001) Long-term changes in plankton community structure and productivity in the North Pacific Subtropical Gyre: the domain shift hypothesis. Deep-Sea Res II 48:1449–1470
Keil RG, Mayer LM, Quay PD et al (1997) Loss of organic matter from riverine particles in deltas. Geochim Cosmochim Acta 61:1507–1511
Keuhl SA, DeMaster DJ, Nittrouer CA (1986) Nature of sediment accumulation on the Amazon continental shelf. Cont Shelf Res 6:209–225
Kranck K (1973) Flocculation of suspended sediment in sea. Nature 246:348–350
Kranck K (1984) The role of flocculation in the filtering of particulate matter in estuaries. In: Kennedy VS (ed) The estuary as a filter. Academic, New York, pp 159–175
Larcombe P, Woolfe K (1999) Increased sediment supply to the Great Barrier Reef will not increase sediment accumulation at most coral reefs. Coral Reefs 18:163–169
Liu JP, Li AC, Xu KH et al (2006) Sedimentary features of the Yangtse River-derived along-shelf clinoform deposit in the East China Sea. Cont Shelf Res 26:2141–2156
Lohrenz SE, Fahnenstiel GL, Redalje DG et al (1999) Nutrients, irradiance, and mixing as factors regulating primary production in coastal waters impacted by the Mississippi River plume. Cont Shelf Res 19:1113–1141
Ludwig W, Probst JL (1996) Predicting the oceanic input of organic carbon by continental erosion. Global Biogeochem Cycles 10:23–41
Martins O, Probst J-L (1991) Biogeochemistry of Major African Rivers: carbon and mineral transport. In: Degens ET, Kempe S, Richey JC (eds) Biogeochemistry of major world rivers. Wiley, Chichester, pp 127–155
Mehrbach C, Culberson CH, Hawley JE (1973) Measurement of the apparent dissociation constants of carbonic acid in seawater at atmospheric pressure. Limnol Oceanogr 18(6):897–907
Meyers PA (2003) Applications of organic geochemistry to palaeolimnological reconstruction: a summary of examples from the Laurentian Great Lakes. Org Geochem 34:261–289
Milliman JD (1995) Sediment discharge to the ocean from small mountainous rivers: the New Guinea example. Geo-Mar Lett 15:127–133
Milliman JD, Syvitski JPM (1992) Geomorphic/tectonic control of sediment discharge to the ocean: the importance of small mountainous rivers. J Geol 100:525–544
Mulholland MR, Floge S, Carpenter EJ et al (2002) Phosphorus dynamics in cultures and natural populations of Trichodesmium spp. Mar Ecol Prog Ser 239:45–55
Muller G, Gastner M (1971) The “karonate bombe” a simple device for the determination of the carbonate content in sediments, soils and other materials. Neues Jahrbuch Mineral Monatsh 10:466–469
Norrish K, Hutton IT (1969) An accurate X-Ray spectrographic method for the analysis of a wide range of geological samples. Geochim Cosmochim Acta 33:431–453
Oubelkheir K, Clementson LA, Webster IT et al (2006) Using inherent optical properties to investigate biogeochemical dynamics in a tropical macrotidal coastal system. J Geophys Res 111:C07021. doi:10.1029/2005JC003113
Owens NPJ (1986) Estuarine nutrification: a naturally occurring fluidised bed reaction? Estuarine. Coast Shelf Sci 22:31–44
Packett R, Dougall C, Rohde K, Noble R (2009) Agricultural lands are hot-spots for annual runoff polluting the southern Great Barrier Reef lagoon. Mar Pollut Bull 58:976–986
Payne TE, Szymczak R, Wait TD (2002) Interactions between dissolved phosphorus and suspended sediments in a tropical estuary. In: Brebbia CA (ed) Coastal environment: environmental problems in coastal regions. WIT Press, Southhampton, pp 219–230
R Development Core Team (2007) R: a language and environment for statistical computing. R Foundation for Statistical Computing, Vienna
Redfield AC, Ketchum BJ, Richards FA (1963) The influence of organisms on the composition of sea water. In: Hill MN (ed) The sea vol 2. Wiley, New York, pp 26–77
Ryan DA, Brooke BP, Bostock H et al (2007) Bedload sediment transport dynamics in a macrotidal embayment, and implications for export to the southern Great Barrier Reef Shelf. Mar Geol 240:197–215
Shapiro L, Brannock WW (1962) Rapid analysis of silicate, carbonate and phosphate rocks. USGS Bulletin 1144-A
Slomp CP, Epping EHG, Helder W et al (1996) A key role for iron-bound phosphorus in authigenic apatite formation in North Atlantic continental platform sediments. J Mar Res 54:1179–1205
Smith SV, Atkinson MJ (1983) Mass balance of carbon and phosphorus in Shark Bay, Western Australia. Limnol Oceanogr 28(4):625–639
Smith WO, DeMaster DJ (1996) Phytoplankton biomass and productivity in the Amazon River plume: correlation with seasonal river discharge. Cont Shelf Res 16:291–319
Smith SV, Veeh HH (1989) Mass balance of biogeochemically active materials (C, N, P) in a hypersaline gulf. Estuar Coast Shelf Sci 29:195–215
Smith J, Douglas GB, Radke LC et al (2008) Fitzroy River Basin, Queensland, Australia. III Identification of Sediment Sources in the Coastal Zone. Environ Chem 5:231–242
Stockner JG, Shortreed KS (1988) Response of Anabaena and Syechoccus to manipulation of nitrogen:phosphorus ratios in a lake fertilization experiment. Limnol Oceanogr 33:1348–1361
Strom RN, Biggs RG (1982) Phosphorus distribution in sediments of the Delaware River estuary. Estuaries 5:95–101
Suttle CA, Harrison PA (1988) Ammonium and phosphate uptake rates, N:P supply ratios, and evidence for N and P limitation in some oligotrophic lakes. Limnol Oceanogr 33:186–202
Takamura N, Nojiri Y (1994) Picoplankton biomass in relation to lake trophic state and the TN:TP ratio of lake water in Japan. J Phycol 30:439–444
Thorp JH, Thoms M, Delong MD (2006) The riverine ecosystem synthesis: biocomplexity in river networks across space and time. River Res Appl 22:123–147
Tian RC, Hu FX, Martin JM (1993) Summer nutrient fronts in the Changjiang (Yantze) River Estuary. Estuar Coast Shelf Sci 37:27–41
Ullman WJ, Sandstrom MW (1987) Dissolved nutrient fluxes from the nearshore sediments of Bowling Green Bay, Central Great Barrier Reef Lagoon (Australia). Estuar Coast Shelf Sci 24:289–303
Webster I, Radke L (2006) Estimating system-wide nitrogen fixation rates in Keppel Bay from linear regression and spatial analysis: a comment on potential calculation errors. In: Abstracts of the 7th International Symposium on GIS and Computer Cartography for Coastal Zone Management, University of Wollongong, Wollongong, 13–16 July 2006
Webster IT, Ford PW, Hancock G (2001) Phosphorus dynamics in Australian lowland rivers. Mar Freshw Res 52:127–137
Webster IT, Atkinson I, Bostock H et al (2006) The fitzroy contaminants project—a study of the nutrient and fine-sediment dynamics of the Fitzroy Estuary and Keppel Bay. Cooperative research centre for coastal zone, estuary & waterway management technical report #42. Brisbane, Queensland
Acknowledgments
This work was conducted under the auspices of the Cooperative Research Centre for Coastal Zone, Estuary & Waterway Management and benefited from extensive inputs of data and ideas from our colleagues in other components of the Fitzroy Agricultural Contaminants subproject. We acknowledge and thank the following other people for their various contributions to this work. Kirrod Broadhurst, Graham Wassell, Paul Ridett and David Munro, the captain and crew of the Rum Rambler, managed navigation and shared their extensive local knowledge. Colin Tindall, Peter Verwey, Bob Noble, Bob Packett and the crew of the Pacific Conquest helped with various aspects of the fieldwork. Ray Degraaf, Stan Rucinski, Andrew Hislop, Tim Johnson and Craig Wintle developed and maintained equipment used on the surveys. Adrian Beech, Lesley Clementson, Rachel Davenport, Algis Juoldvalkis, Alan Hinde, Danny Hunt, Mio Kuhnen, Andy Longmore, Alex McLachlan, Luis Neumann, David Page, Bill Pappas, Tan Kok Piang, John Pike, Neil Ramsay, Carolyn Sandison, Craig Smith, Peter Taylor and Liz Webber prepared and analysed samples and/or provided advice on analytical methods. Chris Fitzgerald, Bianca Reese and Silvio Mezzomo drafted the figures. The manuscript has benefited from discussions with Nugzar Margvelashvili, Bob Noble, David Ryan, Ralf Haese and Helen Bostock. Stephen V. Smith, Perran Cook, Peter Harris, Craig Smith and two anonymous reviewers provided advice that greatly improved the quality of this manuscript. Fieldwork was undertaken under permit from The Great Barrier Reef Marine Parks Authority. This manuscript is published with permission of the executive director, Geoscience Australia.
Author information
Authors and Affiliations
Corresponding author
Rights and permissions
About this article
Cite this article
Radke, L.C., Ford, P.W., Webster, I.T. et al. Biogeochemical Zones Within a Macrotidal, Dry-Tropical Fluvial-Marine Transition Area: A Dry-Season Perspective. Aquat Geochem 16, 1–29 (2010). https://doi.org/10.1007/s10498-009-9070-7
Received:
Accepted:
Published:
Issue Date:
DOI: https://doi.org/10.1007/s10498-009-9070-7