Skip to main content
Log in

Transmission of infectious salmon anaemia virus (ISAV) in farmed populations of Atlantic salmon (Salmo salar)

  • Published:
Archives of Virology Aims and scope Submit manuscript

Summary.

In the present study, 24 smolt production sites were screened for the presence of infectious salmon anaemia virus (ISAV) with the help of a specific real-time RT PCR assay, and 22 of these sites had smolts that were positive. If these smolt production sites are representative for the prevalence of ISAV in Norwegian smolts, then most marine production sites must be considered to be positive for ISAV. In addition, 92 European ISAV isolates have been genotyped based on the hemagglutinin-esterase gene (HE), and their distribution pattern was analysed. This pattern has been coupled to information about the origin of smolt, eggs, and broodfish in those cases where it has been possible to obtain such information, and with information about ISAV in neighbouring farms. The pattern suggests that an important transmission route for the ISAV could be that the salmon farming industry in Norway is circulating some of the isolates in the production cycle, i.e. some sort of vertical or transgenerational transmission may occur. It has also been shown that avirluent ISAV isolates are fairly common in Norwegian farmed salmon. Based on this, it is hypothesized that the change from avirulent to virulent ISAV isolates is a stochastic event that is dependent on the replication frequency of the virus and the time available for changes in a highly polymorphic region (HPR) of the HE gene to occur. This, and the possibility that only avirluent ISAV isolates are vertically transmitted, may explain why ISA most often occurs at marine sites and why no more than about 15 farms get ISA every year in Norway.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Institutional subscriptions

Similar content being viewed by others

References

  • S Blake D Bouchard W Keleher M Opitz BL Nicholson (1999) ArticleTitleGenomic relationships of the North American isolate of infectious salmon anemia virus (ISAV) to the Norwegian strain of ISAV Dis Aquat Org 35 139–144 Occurrence Handle10092977 Occurrence Handle1:CAS:528:DyaK1MXislKgsbs%3D

    PubMed  CAS  Google Scholar 

  • DA Bouchard K Brockway C Giray W Keleher PL Merrill (2001) ArticleTitleFirst report of infectious salmon anemia (ISA) in the United States Bull Eur Ass Fish Pathol 21 IssueID2 86–88

    Google Scholar 

  • SC Clouthier T Rector NEC Brown ED Anderson (2002) ArticleTitleGenomic organization of infectious salmon anemia virus J Gen Virol 83 421–428 Occurrence Handle11807235 Occurrence Handle1:CAS:528:DC%2BD38XhtFGhtrk%3D

    PubMed  CAS  Google Scholar 

  • M Cook-Versloot S Griffiths R Cusack S McGeachy R Ritchie (2004) ArticleTitleIdentification and characterization of infectious salmon anaemia virus (ISAV) haemagglutinin gene highly polymorphic region (HPR) type 0 in North America Bull Eur Ass Fish Pathol 24 IssueID4 203–208

    Google Scholar 

  • CO Cunningham M Snow (2000) ArticleTitleGenetic analysis if infectious salmon anaemia virus (ISAV) from Scotland Dis Aquat Org 41 1–8 Occurrence Handle10907133 Occurrence Handle1:CAS:528:DC%2BD3cXlsF2hsrk%3D

    PubMed  CAS  Google Scholar 

  • CO Cunningham A Gregory J Black I Simpson RS Raynard (2002) ArticleTitleA novel variant of the infectious salmon anaemia virus (ISAV) haemagglutinin gene suggests mechanisms for virus diversity Bull Eur Ass Fish Pathol 22 IssueID6 366–374

    Google Scholar 

  • M Devold K Falk OB Dale B Krossøy E Biering V Aspehau F Nilsen A Nylund (2001) ArticleTitleStrain variation, based on the hemagglutinin gene, in Norwegian ISA virus isolates collected from 1987 to 2001: indications of recombination Dis Aquat Org 47 119–128 Occurrence Handle11775793 Occurrence Handle1:CAS:528:DC%2BD38XovV2ltQ%3D%3D

    PubMed  CAS  Google Scholar 

  • M Devold B Krossøy V Aspehaug A Nylund (2000) ArticleTitleUse of RT-PCR for diagnosis of infectious salmon anaemia virus (ISAV) in carrier sea trout Salmo trutta after experimental infection Dis Aquat Org 40 9–18 Occurrence Handle10785858 Occurrence Handle1:CAS:528:DC%2BD3cXjtF2htL4%3D

    PubMed  CAS  Google Scholar 

  • K Einer-Jensen P Ahrens R Forsber N Lorenzen (2004) ArticleTitleEvolution of the fish rhabdovirus viral haemorrhagic septicaemia vius J Gen Virol 85 1167–1179 Occurrence Handle15105533 Occurrence Handle10.1099/vir.0.79820-0 Occurrence Handle1:CAS:528:DC%2BD2cXktFert70%3D

    Article  PubMed  CAS  Google Scholar 

  • K Hanada Y Suzuki T Gojobori (2004) ArticleTitleA large variation in the rates of synonymous substitution for RNA viruses and its relationship to diversity of viral infection and transmission modes Mol Biol Evol 21 1074–1080 Occurrence Handle15014142 Occurrence Handle10.1093/molbev/msh109 Occurrence Handle1:CAS:528:DC%2BD2cXksVymurY%3D

    Article  PubMed  CAS  Google Scholar 

  • M Hasegawa H Kishino TA Yano (1985) ArticleTitleDating of the human-ape splitting by molecular clock of mitochondrial DNA J Mol Evol 22 160–174 Occurrence Handle3934395 Occurrence Handle10.1007/BF02101694 Occurrence Handle1:CAS:528:DyaL2MXmtFSns7g%3D

    Article  PubMed  CAS  Google Scholar 

  • O Hungnes TØ Jonassen CM Jonassen B Grinde (2000) ArticleTitleMolecular epidemiology of viral infections. How sequence information helps us understand the evolution and dissemination of viruses APMIS 108 81–97 Occurrence Handle10737453 Occurrence Handle10.1034/j.1600-0463.2000.d01-31.x Occurrence Handle1:CAS:528:DC%2BD3cXitVCmt70%3D

    Article  PubMed  CAS  Google Scholar 

  • JA Inglis J Bruce CO Cunningham (2000) ArticleTitleNucleotide sequence variation in isolates ofinfectious salmon anaemia virus (ISAV) from Atlantic salmon Salmo salar in Scotland and Norway Dis Aquat Org 43 71–76 Occurrence Handle11129383 Occurrence Handle1:CAS:528:DC%2BD3MXjsFGmtg%3D%3D

    PubMed  CAS  Google Scholar 

  • GM Jenkins A Rambaut OG Pybus EC Holmes (2002) ArticleTitleRates of molecular evolution in RNA viruses: A quantitative Phylogenetic analysis J Mol Evol 54 156–165 Occurrence Handle11821909 Occurrence Handle10.1007/s00239-001-0064-3 Occurrence Handle1:CAS:528:DC%2BD38XhtVCgurs%3D

    Article  PubMed  CAS  Google Scholar 

  • FSB Kibenge ON Garate G Johnson R Arriagada MJT Kibenge D Wadowska (2001a) ArticleTitleIsolation and identification of infectious salmon anaemia virus (ISAV) from Coho salmon in Chile Dis Aquat Org 45 9–18 Occurrence Handle1:CAS:528:DC%2BD3MXksFamtLs%3D

    CAS  Google Scholar 

  • FSB Kibenge MJT Kibenge PK McKenna P Stothard R Marshall RR Cusack S McGeachy (2001b) ArticleTitleAntigenic variation among isolates of infectious salmon anaemia virus correlates with genetic variation of the viral haemagglutinin gene J Gen Virol 82 2869–2879 Occurrence Handle1:CAS:528:DC%2BD3MXovVClurs%3D

    CAS  Google Scholar 

  • B Krossøy F Nilsen K Falk C Endresen A Nylund (2001a) ArticleTitlePhylogenetic analysis of infectious salmon anaemia virus isolates from Norway, Canada and Scotland Dis Aquat Org 44 1–6

    Google Scholar 

  • B Krossøy M Devold L Sanders PM Knappskog V Aspehaug K Falk A Nylund S Koumans C Endresen E Biering (2001b) ArticleTitleCloning and identification of the infectious salmon anaemia virus haemagglutinin J Gen Virol 82 1757–1765

    Google Scholar 

  • G Kurath KA Garver RM Troyer EJ Emmenegger K Einer-Jensen ED Anderson (2003) ArticleTitlePhylogeography of infectious haematopoietic necrosis virus in North America J Gen Virol 84 803–814 Occurrence Handle12655081 Occurrence Handle10.1099/vir.0.18771-0 Occurrence Handle1:CAS:528:DC%2BD3sXjtVWqur8%3D

    Article  PubMed  CAS  Google Scholar 

  • Lyngøy C (2003) Infectious salmon anaemia in Norway and the Faeroe Islands: An industrial approach. In: Miller O, Cipriniano RC (eds), International response to infectious salmon anaemia: Prevention, control and eradication, pp 97–109

  • JE Mullins D Groman D Wadowska (1998) ArticleTitleInfectious salmon anaemia in salt water atlantic salmon (Salmo salar L.) in New Brunswick, Canada Bull Eur Ass Fish Pathol 18 IssueID4 110–114

    Google Scholar 

  • Multiple authors (2005) Experiments with ISAV infected broodfish (Atlantic salmon). Can the ISAV be transmitted via gonadal products? (Report in Norwegian, http://www.salmobreed.no).

  • ST Nichol JE Rowe JR Winton (1995) ArticleTitleMolecular epizootiology and evolution of the glycoprotein and nin-virion protein genes of infectious hematopoietic necrosis virus, a fish rhabdovirus Virus Res 2–3 159–173 Occurrence Handle10.1016/0168-1702(95)00054-T

    Article  Google Scholar 

  • A Nylund M Devold H Plarre E Isdal M Arseth (2003) ArticleTitleEmergence and maintenance of infectious salmon anaemia virus (ISAV) in Europe: A new hypothesis Dis Aquat Org 56 11–24 Occurrence Handle14524497 Occurrence Handle1:STN:280:DC%2BD3svmt1Cnuw%3D%3D

    PubMed  CAS  Google Scholar 

  • A Nylund T Hovland K Watanabe C Endresen (1995) ArticleTitlePresence of infectious salmon anaemia virus (ISAV) in different organs of Salmo salar L. collected from three fish farms J Fish Dis 18 135–145 Occurrence Handle10.1111/j.1365-2761.1995.tb00271.x

    Article  Google Scholar 

  • RDM Page (1996) ArticleTitleTREEVIEW: an application to display phylogenetic trees on personal computers Comp Appl Biosc 12 357–358 Occurrence Handle8902363 Occurrence Handle1:STN:280:ByiD2MfgtlA%3D

    PubMed  CAS  Google Scholar 

  • R Page E Holmes (1998) Molecular evolution: A phylogenetic approach Blackwell Science Oxford

    Google Scholar 

  • D Posada KA Crandall (1998) ArticleTitleModeltest: testing the model og DNA substitution Bioinformatics Application note 14 IssueID9 817–818 Occurrence Handle1:CAS:528:DyaK1MXktlCltw%3D%3D

    CAS  Google Scholar 

  • H Plarre M Devold M Snow A Nylund (2005) ArticleTitlePrevalence of infectious salmon anaemia virus (ISAV) in wild salmonids in western Norway Dis Aquat Org 66 71–79 Occurrence Handle16175969 Occurrence Handle1:STN:280:DC%2BD2MrgsVSjtA%3D%3D

    PubMed  CAS  Google Scholar 

  • A Rambaut (2000) ArticleTitleEstimating the rate of molecular evolution: incorporating non-contemporaneous sequences into maximum likelihood phylogenies Bioinformatics 16 IssueID4 395–399 Occurrence Handle10869038 Occurrence Handle10.1093/bioinformatics/16.4.395 Occurrence Handle1:CAS:528:DC%2BD3cXltFOlu7c%3D

    Article  PubMed  CAS  Google Scholar 

  • RS Raynard AG Murray A Gregory (2001) ArticleTitleInfectious salmon anaemia virus in wild fish from Scotland Dis Aquat Org 46 93–100 Occurrence Handle11678233 Occurrence Handle1:STN:280:DC%2BD3MrntFeqtA%3D%3D

    PubMed  CAS  Google Scholar 

  • E Rimstad S Mjaaland M Snow AB Mikalsen CO Cunningham (2001) ArticleTitleCharacterization of the infectious salmon anemia virus genomic segment that encodes the putative hemagglutinin J Virol 75 IssueID11 5252–5356 Occurrence Handle10.1128/JVI.75.11.5352-5356.2001

    Article  Google Scholar 

  • RJ Ritchie M Cook K Melville N Simard R Cusack S Griffiths (2001) ArticleTitleIdentification of infectious salmon anaemia virus in Atlantic salmon from Nova Scotia (Canada): evidence for functional strain differences Dis Aquat Org 44 171–178 Occurrence Handle11383564 Occurrence Handle1:CAS:528:DC%2BD3MXjvFygsrw%3D

    PubMed  CAS  Google Scholar 

  • HD Rodger T Turnbull F Muir S Millar RH Richards (1998) ArticleTitleInfectious salmon anaemia (ISA) in the United Kingdom Bull Eur Ass Fish Pathol 18 IssueID4 115–116

    Google Scholar 

  • HM Rowley SJ Campell WL Curran T Turnbull DG Bryson (1999) ArticleTitleIsolation of infectious salmon anaemia virus (ISAV) from Scottish farmed Atlantic salmon, Salmo salar L J Fish Dis 22 483–487 Occurrence Handle10.1046/j.1365-2761.1999.00190.x

    Article  Google Scholar 

  • M Snow N Bain J Black V Taupin CO Cunningham JA King HF Skall RS Raynard (2004) ArticleTitleGenetic population structure of marine viral haemorrhagic septicaemia virus (VHSV) Dis Aquat Org 61 11–21 Occurrence Handle15584406 Occurrence Handle1:STN:280:DC%2BD2cnhtV2itg%3D%3D Occurrence Handle10.3354/dao061011

    Article  PubMed  CAS  Google Scholar 

  • Swofford DL (1998) Phylogenetic analysis using parsimony and other methods, version 4.0. Sinauer, Sunderland

  • Z Yang (1997) ArticleTitlePAML: A program package for Phylogenetic analysis by maximum likelihood CABIOS 13 555–556 Occurrence Handle9367129 Occurrence Handle1:CAS:528:DyaK2sXntlGnu7s%3D

    PubMed  CAS  Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Rights and permissions

Reprints and permissions

About this article

Cite this article

Nylund, A., Plarre, H., Karlsen, M. et al. Transmission of infectious salmon anaemia virus (ISAV) in farmed populations of Atlantic salmon (Salmo salar). Arch Virol 152, 151–179 (2007). https://doi.org/10.1007/s00705-006-0825-9

Download citation

  • Received:

  • Accepted:

  • Published:

  • Issue Date:

  • DOI: https://doi.org/10.1007/s00705-006-0825-9

Keywords

Navigation