Abstract
Atopic dermatitis (AD) is a common, itchy skin disease of complex inheritance characterized by dermal and epidermal inflammation. The heritability is considerable and well documented. To date, four genome scans have examined the AD phenotype, showing replicated linkage at 3p26-22, 3q13-21 and 18q11-21. Our previous AD scan showed evidence of linkage to loci at 3p and 18q, and furthermore at 4p15-14. In order to further investigate the genetic basis of AD, we collected and analysed a new Danish family sample consisting of 130 AD sib pair families (555 individuals including 295 children with AD). AD was diagnosed after clinical examination, AD severity was scored and specific IgE was determined. A linkage scan of chromosome 3, 4 and 18 was performed using 91 microsatellite markers. Linkage analyses were performed of dichotomous phenotypes and semi-quantitative traits including the AD severity score. We analysed the novel AD sample alone and together with the previously examined sample. AD severity showed a maximum Z-score of 3.7 at 4q22.1 suggesting the localization of a novel gene for AD severity. A maximum MOD score of 4.6 was obtained at 3p24 for the AD phenotype, providing the first significant linkage of AD at this locus. A maximum MLS score of 3.3 was obtained at 3q21 for IgE-associated AD, and evidence of linkage was also obtained at 3p22.2-21.31, 3q13, 4q35, and 18q12. The results presented should provide a firm basis for gene-targeting studies of AD and related disorders.
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Abbreviations
- AD:
-
Atopic dermatitis
- LOD:
-
Logarithm of odds
- MLS:
-
Maximum likelihood score
- NIgE:
-
Number of positive IgEs
- IAD:
-
IgE-associated AD
References
Abecasis GR, Cherny SS, Cookson WO, Cardon LR (2002) Merlin—rapid analysis of dense genetic maps using sparse gene flow trees. Nat Genet 30:97–101
Barbieri MA, Roberts RL, Gumusboga A, Highfield H, Alvarez-Dominguez C, Wells A, Stahl PD (2000) Epidermal growth factor and membrane trafficking. EGF receptor activation of endocytosis requires Rab5a. J Cell Biol 151:539–550
Barnes KC (2000) Evidence for common genetic elements in allergic disease. J Allergy Clin Immunol 106:S192–S200
Becker KG, Simon RM, Bailey-Wilson JE, Freidlin B, Biddison WE, McFarland HF, Trent JM (1998) Clustering of non-major histocompatibility complex susceptibility candidate loci in human autoimmune diseases. Proc Natl Acad Sci USA 95:9979–9984
Bohme M, Wickman M, Lennart Nordvall S, Svartengren M, Wahlgren CF (2003) Family history and risk of atopic dermatitis in children up to 4 years. Clin Exp Allergy 33:1226–1231
Braae Olesen A, Bang K, Juul S, Thestrup-Pedersen K (2001) Development and validation of a questionnaire for diagnosing atopic dermatitis. Acta Derm Venereol 81:277–281
Bradley M, Soderhall C, Luthman H, Wahlgren CF, Kockum I, Nordenskjold M (2002) Susceptibility loci for atopic dermatitis on chromosomes 3, 13, 15, 17 and 18 in a Swedish population. Hum Mol Genet 11:1539–1548
Chang YP, Liu X, Kim JD, Ikeda MA, Layton MR, Weder AB, Cooper RS, Kardia SL, Rao DC, Hunt SC, Luke A, Boerwinkle E, Chakravarti A (2007) Multiple genes for essential-hypertension susceptibility on chromosome 1q. Am J Hum Genet 80:253–264
Cookson WO, Ubhi B, Lawrence R, Abecasis GR, Walley AJ, Cox HE, Coleman R, Leaves NI, Trembath RC, Moffatt MF, Harper JI (2001) Genetic linkage of childhood atopic dermatitis to psoriasis susceptibility loci. Nat Genet 27:372–373
Corydon TJ, Haagerup A, Jensen TG, Binderup HG, Petersen MS, Kaltoft K, Vestbo J, Kruse TA, Borglum AD (2007) A functional CD86 polymorphism associated with asthma and related allergic disorders. J Med Genet 44:509–515
Daniels SE, Bhattacharrya S, James A, Leaves NI, Young A, Hill MR, Faux JA, Ryan GF, le Souef PN, Lathrop GM, Musk AW, Cookson WO (1996) A genome-wide search for quantitative trait loci underlying asthma. Nature 383:247–250
Enlund F, Samuelsson L, Enerback C, Inerot A, Wahlstrom J, Yhr M, Torinsson A, Riley J, Swanbeck G, Martinsson T (1999) Psoriasis susceptibility locus in chromosome region 3q21 identified in patients from southwest Sweden. Eur J Hum Genet 7:783–790
Flohr C, Johansson SG, Wahlgren CF, Williams H (2004) How atopic is atopic dermatitis? J Allergy Clin Immunol 114:150–158
Garcia-Gonzalo FR, Rosa JL (2005) The HERC proteins: functional and evolutionary insights. Cell Mol Life Sci 62:1826–1838
Haagerup A, Bjerke T, Schiotz PO, Dahl R, Binderup HG, Tan Q, Kruse TA (2004) Atopic dermatitis—a total genome-scan for susceptibility genes. Acta Derm Venereol 84:346–352
Hall IP (1998) Genetic factors in asthma severity. Clin Exp Allergy 28(Suppl 5):16–20 Discussion 26–28
Hanifin J, Rajka G (1980) Diagnostic features of atopic dermatitis. Acta Derm Venereol 92:44–47
Hao L, Sayers I, Cakebread JA, Barton SJ, Beghe B, Holgate ST, Sampson AP, Holloway JW (2006) The cysteinyl-leukotriene type 1 receptor polymorphism 927T/C is associated with atopy severity but not with asthma. Clin Exp Allergy 36:735–741
Herz U, Bunikowski R, Renz H (1998) Role of T cells in atopic dermatitis. New aspects on the dynamics of cytokine production and the contribution of bacterial superantigens. Int Arch Allergy Immunol 115:179–190
Hodge SE, Abreu PC, Greenberg DA (1997) Magnitude of type I error when single-locus linkage analysis is maximized over models: a simulation study. Am J Hum Genet 60:217–227
Hoffjan S, Epplen JT (2005) The genetics of atopic dermatitis: recent findings and future options. J Mol Med 83:682–692
Inoue T, Okano Y, Kado Y, Aritake K, Irikura D, Uodome N, Okazaki N, Kinugasa S, Shishitani H, Matsumura H, Kai Y, Urade Y (2004) First determination of the inhibitor complex structure of human hematopoietic prostaglandin D synthase. J Biochem (Tokyo) 135:279–283
Jutel M, Watanabe T, Klunker S, Akdis M, Thomet OA, Malolepszy J, Zak-Nejmark T, Koga R, Kobayashi T, Blaser K, Akdis CA (2001) Histamine regulates T-cell and antibody responses by differential expression of H1 and H2 receptors. Nature 413:420–425
Krawczak M (2001) ASP—a simulation-based power calculator for genetic linkage studies of qualitative traits, using sib-pairs. Hum Genet 109:675–677
Kruglyak L, Lander ES (1995) Complete multipoint sib-pair analysis of qualitative and quantitative traits. Am J Hum Genet 57:439–454
Kurz T, Altmueller J, Strauch K, Ruschendorf F, Heinzmann A, Moffatt MF, Cookson WO, Inacio F, Nurnberg P, Stassen HH, Deichmann KA (2005) A genome-wide screen on the genetics of atopy in a multiethnic European population reveals a major atopy locus on chromosome 3q21.3. Allergy 60:192–199
Larsen FS, Holm NV, Henningsen K (1986) Atopic dermatitis. A genetic–epidemiologic study in a population-based twin sample. J Am Acad Dermatol 15:487–494
Lee YA, Wahn U, Kehrt R, Tarani L, Businco L, Gustafsson D, Andersson F, Oranje AP, Wolkertstorfer A, v Berg A, Hoffmann U, Kuster W, Wienker T, Ruschendorf F, Reis A (2000) A major susceptibility locus for atopic dermatitis maps to chromosome 3q21. Nat Genet 26:470–473
Mascia F, Mariani V, Girolomoni G, Pastore S (2003) Blockade of the EGF receptor induces a deranged chemokine expression in keratinocytes leading to enhanced skin inflammation. Am J Pathol 163:303–312
Matovinovic E, Solberg O, Shusterman D (2003) Epidermal growth factor receptor—but not histamine receptor—is upregulated in seasonal allergic rhinitis. Allergy 58:472–475
Matthews D, Fry L, Powles A, Weber J, McCarthy M, Fisher E, Davies K, Williamson R (1996) Evidence that a locus for familial psoriasis maps to chromosome 4q. Nat Genet 14:231–233
Moffatt MF, Cookson WO (1998) The genetics of asthma. Maternal effects in atopic disease. Clin Exp Allergy 28(Suppl 1):56–61 Discussion 65–66
Mortz CG, Lauritsen JM, Bindslev-Jensen C, Andersen KE (2001) Prevalence of atopic dermatitis, asthma, allergic rhinitis, and hand and contact dermatitis in adolescents. The Odense Adolescence Cohort Study on Atopic Diseases and Dermatitis. Br J Dermatol 144:523–532
Ober C, Cox NJ, Abney M, Di Rienzo A, Lander ES, Changyaleket B, Gidley H, Kurtz B, Lee J, Nance M, Pettersson A, Prescott J, Richardson A, Schlenker E, Summerhill E, Willadsen S, Parry R (1998) Genome-wide search for asthma susceptibility loci in a founder population. The Collaborative Study on the Genetics of Asthma. Hum Mol Genet 7:1393–1398
Roberts SB, MacLean CJ, Neale MC, Eaves LJ, Kendler KS (1999) Replication of linkage studies of complex traits: an examination of variation in location estimates. Am J Hum Genet 65:876–884
Ruiz RG, Kemeny DM, Price JF (1992) Higher risk of infantile atopic dermatitis from maternal atopy than from paternal atopy. Clin Exp Allergy 22:762–766
Schwindt CD, Tjoa T, Floro JN, McLaren C, Delfino RJ (2006) Association of atopy to asthma severity and medication use in children. J Asthma 43:439–446
SCORAD index (1993) Severity scoring of atopic dermatitis: the SCORAD index. Consensus Report of the European Task Force on Atopic Dermatitis. Dermatology 186:23–31
Soderhall C, Marenholz I, Kerscher T, Ruschendorf F, Esparza-Gordillo J, Worm M, Gruber C, Mayr G, Albrecht M, Rohde K, Schulz H, Wahn U, Hubner N, Lee YA (2007) Variants in a novel epidermal collagen gene (COL29A1) are associated with atopic dermatitis. PLoS Biol 5:e242
Strauch K, Furst R, Ruschendorf F, Windemuth C, Dietter J, Flaquer A, Baur MP, Wienker TF (2005) Linkage analysis of alcohol dependence using MOD scores. BMC Genet 6(Suppl 1):S162
Thepen T, Langeveld-Wildschut EG, Bihari IC, van Wichen DF, van Reijsen FC, Mudde GC, Bruijnzeel-Koomen CA (1996) Biphasic response against aeroallergen in atopic dermatitis showing a switch from an initial TH2 response to a TH1 response in situ: an immunocytochemical study. J Allergy Clin Immunol 97:828–837
Wadonda-Kabondo N, Sterne JA, Golding J, Kennedy CT, Archer CB, Dunnill MG (2004) Association of parental eczema, hay fever, and asthma with atopic dermatitis in infancy: birth cohort study. Arch Dis Child 89:917–921
Wainszelbaum MJ, Proctor BM, Pontow SE, Stahl PD, Barbieri MA (2006) IL4/PGE2 induction of an enlarged early endosomal compartment in mouse macrophages is Rab5-dependent. Exp Cell Res 312:2238–2251
Weeks DE, Lehner T, Squires-Wheeler E, Kaufmann C, Ott J (1990) Measuring the inflation of the LOD score due to its maximization over model parameter values in human linkage analysis. Genet Epidemiol 7:237–243
Williams HC, Burney PG, Hay RJ, Archer CB, Shipley MJ, Hunter JJ, Bingham EA, Finlay AY, Pembroke AC, Graham-Brown RA et al (1994) The U.K. Working Party’s Diagnostic Criteria for Atopic Dermatitis. I. Derivation of a minimum set of discriminators for atopic dermatitis. Br J Dermatol 131:383–396
Witte JS, Suarez BK, Thiel B, Lin J, Yu A, Banerjee TK, Burmester JK, Casey G, Catalona WJ (2003) Genome-wide scan of brothers: replication and fine mapping of prostate cancer susceptibility and aggressiveness loci. Prostate 57:298–308
Wjst M, Fischer G, Immervoll T, Jung M, Saar K, Rueschendorf F, Reis A, Ulbrecht M, Gomolka M, Weiss EH, Jaeger L, Nickel R, Richter K, Kjellman NI, Griese M, von Berg A, Gappa M, Riedel F, Boehle M, van Koningsbruggen S, Schoberth P, Szczepanski R, Dorsch W, Silbermann M, Wichmann HE et al (1999) A genome-wide search for linkage to asthma. German Asthma Genetics Group. Genomics 58:1–8
Xu X, Weiss S, Xu X, Wei LJ (2000) A unified Haseman–Elston method for testing linkage with quantitative traits. Am J Hum Genet 67:1025–1028
Yokouchi Y, Nukaga Y, Shibasaki M, Noguchi E, Kimura K, Ito S, Nishihara M, Yamakawa-Kobayashi K, Takeda K, Imoto N, Ichikawa K, Matsui A, Hamaguchi H, Arinami T (2000) Significant evidence for linkage of mite-sensitive childhood asthma to chromosome 5q31-q33 near the interleukin 12 B locus by a genome-wide search in Japanese families. Genomics 66:152–160
Acknowledgments
We thank the families for participating in the project. The study was supported by grants from The Faculty of Health Sciences, University of Aarhus, The Aarhus University Research Foundation, ALK Abello, The Danish Lung Association, The Danish Asthma-Allergy Association, the Ville Heise, the Hørslev, the Mimi and Victor Larsen, the Aage Bang, the Ellen Pedersen, the Marie Dorthea and Holger From, Haderslev, and the Augustinus Foundation.
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Christensen, U., Møller-Larsen, S., Nyegaard, M. et al. Linkage of atopic dermatitis to chromosomes 4q22, 3p24 and 3q21. Hum Genet 126, 549–557 (2009). https://doi.org/10.1007/s00439-009-0692-z
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DOI: https://doi.org/10.1007/s00439-009-0692-z