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Organization and sequence of five tRNA genes and of an unidentified reading frame in the wheat chloroplast genome: evidence for gene rearrangements during the evolution of chloroplast genomes

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Summary

The genes for the initiator tRNACAU Met. tRNAUCC Gly, tRNAGGU Thr, tRNAUUC Glu and tRNAGUA Tyr and an open reading frame of 62 codons have been identified by sequencing a 2,358 by BamHl and a 1,378 by BamHI-Sst2 DNA fragments from wheat chloroplasts. A comparison of the organization of these five tRNA genes and of the open reading frame on the wheat, tobacco and spinach chloroplast genomes suggests that at least three genomic inversions must have occurred during the evolution of the wheat chloroplast genome from a spinach-like ancestor genome. Furthermore, it seems that in wheat the 91 by intergenic region between the genes for the initiator tRNAMet and the gene for tRNAUCC Gly is one end-point of the 20 kbp genomic inversion proposed by Palmer and Thompson in the case of maize (Palmer and Thompson 1982). A 119 bp duplication is located at this junction: the first copy comprises the 91 by of the intergenic region and the first 28 by of the tRNAMet gene, the second copy is found downstream of the tRNAMet gene.

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References

  • Alt J, Winter P, Sebald W, Moser JG, Schedel R, Westhoff P, Herrmann RG (1983) Curr Genet 7:129–138

    Google Scholar 

  • Alt J, Morris J, Westhoff P, Herrmann RG (1984) Curr Genet 8:597–606

    Google Scholar 

  • Bedbrook JR, Link G, Coen DM, Bogorad L, Rich A (1978) Proc Natl Acad Sci USA 75:3060–3064

    Google Scholar 

  • Bohnert HJ, Crouse EJ, Schmitt JM (1982) In: Parthier B, Boulter D (eds) Encyclopedia of plant physiology, nucleic acids and proteins in plant II. Springer, Berlin Heidelberg, New Series 14B:475–530

    Google Scholar 

  • Bowman CM, Koller B, Delius H, Dyer TA (1981) Mol Gen Genet 183:93–101

    Google Scholar 

  • Bowman CM, Bonnard G, Dyer TA (1983) Theor Appl Genet 65:247–262

    Google Scholar 

  • Canaday J, Guillemaut P, Weil JH (1980) Nucleic Acids Res 8:999–1008

    Google Scholar 

  • Clewell DB, Helinski DR (1969) Proc Natl Acad Sci USA 62:1159–1166

    Google Scholar 

  • Crouse EJ, Bohnert HJ, Schmitt JM (1984) Chloroplast RNA synthesis. In: Ellis RJ (ed) Chloroplast biogenesis, Seminar Series of the Society for Experimental Biology. Cambridge University Press, 21:83–136

  • Deno H, Sugiura M (1983) Nucleic Acids Res 11:8407–8414

    Google Scholar 

  • Deno H, Sugiura M (1984) Proc Natl Acad Sci USA 81:405–408

    Google Scholar 

  • Deno H, Shinozaki K, Sugiura M (1983) Nucleic Acids Res 11:2185–2191

    Google Scholar 

  • Ecarot-Charrier B, Cedergren RS (1976) FEBS Lett 63:287–290

    Google Scholar 

  • Fluhr R, Edelman M (1981) Nucleic Acids Res 9:6841–6853

    Google Scholar 

  • Holschuh K, Bottomley W, Whitfeld PR (1983) Nucleic Acids Res 11:8547–8554

    Google Scholar 

  • Holschuh K, Bottomley W, Whitfeld PR (1984a) Plant Mol Biol 3:313–317

    Google Scholar 

  • Holschuh K, Bottomley W, Whitfeld PR (1984b) Nucleic Acids Res 12:8819–8834

    Google Scholar 

  • Hopp TP, Woods KR (1981) Proc Natl Acad Sci USA 78:3824–3828

    Google Scholar 

  • Howe CJ, Auffret AD, Doherty A, Bowman CM, Dyer TA, Gray JC (1982) Proc Natl Acad Sci USA 79:6903–6907

    Google Scholar 

  • Howe CJ, Bowman CM, Dyer TA, Gray JC (1983) Mol Gen Genet 190:51–55

    Google Scholar 

  • Krebbers E, Steinmetz A, Bogorad L (1984) Plant Mol Biol 3:13–20

    Google Scholar 

  • Krebbers ET (1983) Characterization of some Zea mays chloroplast genes. PhD thesis, Harvard University, Cambridge, Mass

    Google Scholar 

  • Kung SD, Zhu YS, Shen GF (1982) Theor Appl Genet 61:73–79

    Google Scholar 

  • Kuntz M, Weil JH, Steinmetz AA (1984) Nucleic Acids Res 12:5037–5047

    Google Scholar 

  • Michel F, Dujon B (1983) EMBO J 2:33–38

    Google Scholar 

  • Ohme M, Kamogashira T, Shinozaki K, Sugiura M (1984) Nucleic Acids Res 12:6741–6749

    Google Scholar 

  • Palmer JD, Thompson WF (1982) Cell 29:537–550

    Google Scholar 

  • Quigley F, Grienberger JM, Weil JH (1985) Plant Mol Biol 4:305–310

    Google Scholar 

  • Rasmussen OF, Stummann BM, Henningsen KW (1984) Nucleic Acids Res 12:9143–9153

    Google Scholar 

  • Schwarz Z, Jolly SO, Steinmetz AA, Bogorad L (1981) Proc Natl Acad Sci USA 78:3423–3427

    Google Scholar 

  • Smith AJH (1980) Methods Enzymol 65:560–580

    Google Scholar 

  • Sprinzl M, Gauss DH (1984) Nucleic Acids Res 12:r59-r132

    Google Scholar 

  • Steinmetz AA, Krebbers ET, Schwarz Z, Gubbins EJ, Bogorad L (1983) J Biol Chem 258:5503–5511

    Google Scholar 

  • Sugita M, Sugiura M (1984) Mol Gen Genet 195:308–313

    Google Scholar 

  • Sugita M, Kato A, Shimada H, Sugiura M (1984) Mol Gen Genet 194:200–205

    Google Scholar 

  • Vedel F, Lebacq P, Quetier F (1980) Theor Appl Genet 58:219–224

    Google Scholar 

  • Westhoff P, Nelson N, Bunemann H, Herrmann RG (1981) Curr Genet 4:109–120

    Google Scholar 

  • Zurawski G, Bottomley W, Whitfeld PR (1984) Nucleic Acids Res 12:6547–6558

    Google Scholar 

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Quigley, F., Weil, J.H. Organization and sequence of five tRNA genes and of an unidentified reading frame in the wheat chloroplast genome: evidence for gene rearrangements during the evolution of chloroplast genomes. Curr Genet 9, 495–503 (1985). https://doi.org/10.1007/BF00434054

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  • DOI: https://doi.org/10.1007/BF00434054

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