Abstract
Traits for biomass production and composition make Miscanthus a promising bioenergy crop for different bioconversion routes. They need to be considered in miscanthus breeding programs as they are subjected to genetic and genetic × environment factors. The objective was to estimate the genetic parameters of an M. sinensis population grown during 4 years in two French locations. In each location, the experiment was established according to a staggered-start design in order to decompose the year effect into age and climate effects. Linear mixed models were used to estimate genetic variance, genotype × age, genotype × climate interaction variances, and residual variances. Individual plant broad-sense heritability means ranged from 0.42 to 0.62 for biomass production traits and were more heritable than biomass composition traits with means ranging from 0.26 to 0.47. Heritability increased through age for most of the biomass production and composition traits. Low genetic variance along with large genotype × age and genotype × climate interaction variances tended to decrease the heritability of biomass production traits for young plant ages. Most of the production traits showed large interaction variances for age and climate in both locations, while biomass composition traits highlighted large interaction variances due to climate in Orléans. The genetic and phenotypic correlations between biomass production and composition traits were positive, while hemicelluloses were negatively correlated with all traits. Selection is difficult on young plants as the heritability is too low. The joint improvement of biomass production and composition traits would help provide a better response of miscanthus to selection.
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Data Availability
This work was performed with the facilities of the Plant Bioinformatics Facility of INRAE-URGI (https://doi.org/10.15454/1.5572414581735654E12)and
(https://doi.org/10.15454/1NVRNJ) for datasets related to phenotyping resources.
These data are common to those of paper [72].
Code Availability
Not applicable.
Abbreviations
- ABM_tDMha:
-
Aboveground biomass yield
- ADF_%DM:
-
Acid detergent fiber
- ADL_%DM – ADL_%CW:
-
Acid detergent lignin
- Ash_%DM:
-
Ash
- CH_cm:
-
Canopy height
- CGDD:
-
Cumulated growing degree-days
- CL_%DM – CL_%CW:
-
Cellulose
- CW:
-
Cell wall
- C50_cm:
-
Plant circumference
- DM:
-
Dry matter
- ETPP:
-
Penman potential evapotranspiration
- GBFOr:
-
Unité expérimentale Génétique Biomasse Forestières Orléans
- GCIE:
-
Unité expérimentale Grandes Cultures Innovation Environnement
- GnpIS:
-
Multispecies integrative information system
- GWAS:
-
Genome-wide association study
- \({\mathrm{H}}_{sl}^{2}\) :
-
Individual plant broad-sense heritability
- \({\mathrm{H}}_{Pi}^{2}\) :
-
Progeny-mean broad-sense heritability
- HEM_%DM – HEM_%CW:
-
Hemicelluloses
- HMax_cm:
-
Plant maximum height
- IJPB:
-
Institut Jean-Pierre Bourgin
- MaxT:
-
Air maximum temperature
- Mal:
-
Malepartus
- MeanH:
-
Mean humidity
- MeanT:
-
Air mean temperature
- MinT:
-
Air minimum temperature
- MinTs:
-
Soil minimum temperature
- NDF_%DM:
-
Neutral detergent fiber
- PAR:
-
Photosynthetically active radiation
- PCA:
-
Principal component analysis
- Prec_M:
-
Mean precipitation
- Prec_S:
-
Cumulated precipitation
- PSNb:
-
Plant stem number
- QTL:
-
Quantitative trait loci
- Sil:
-
Silberspinne
- URGI:
-
Unité de Recherche Génomique-Info
- VPD:
-
Vapor-pressure deficit
- VPD_M:
-
Maximum vapor-pressure deficit
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Acknowledgements
The authors wish to acknowledge each member of the staff who worked for the establishment and phenotyping of each trial in INRAE experimental stations: GCIE–Picardie team in Estrées-Mons, GBFOr team in Orléans, and IJPB team in Versailles. The authors thank Rebecca James and Andrea Rau who edited the English text.
Funding
This work has benefited from the support of the Investments for the Future program (grant ANR-11-BTBR-0006-BFF) managed by the French National Research Agency (Agence Nationale de la Recherche, ANR).
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MB-H carried out the conception and the design of the study. EM, SA, LF, GB, and RR prepared the material and carried out phenotyping data management and collection. YG realized NIRS data collection and predictions. RR, MB-H, and SV contributed to the analysis of the data. RR wrote the manuscript and all authors commented the manuscript.
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Raverdy, R., Mignot, E., Arnoult, S. et al. Estimation of Genetic Parameters of Biomass Production and Composition Traits in Miscanthus sinensis Using a Staggered-Start Design. Bioenerg. Res. 15, 735–754 (2022). https://doi.org/10.1007/s12155-022-10459-5
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DOI: https://doi.org/10.1007/s12155-022-10459-5