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Molecular cloning and function assay of a chalcone isomerase gene (GbCHI) from Ginkgo biloba

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Abstract

Chalcone isomerase (CHI, EC 5.5.1.6) is one of the key enzymes in the flavonoid biosynthesis pathway catalyzing the stereospecific isomerization of chalcones into their corresponding (2S)-flavanones. In this investigation, both the cDNA sequence and the genomic sequence encoding the chalcone isomerase from Ginkgo biloba L. (designated as GbCHI) were isolated from the leaves. The GbCHI gene contained two introns and three extrons and encoded a peptide of 244 amino acids with a predicted molecular mass of 26.29 kDa and a pI of 7.76. RQPCR showed that GbCHI was expressed in a tissue-specific manner in G. biloba. Expression of GbCHI was also up-regulated by UV-B irradiation or treatment with 5-aminolevulinic acid or three plant growth regulator—ethylene, abscisic acid, and chlormequat—and these effects were consistent with analysis of the GbCHI promoter region. The recombinant protein was successfully expressed in an E.coli strain with the pET-28a vector. In vitro enzyme activity, assayed by HPLC, indicated that recombinant GbCHI protein could catalyze the formation of naringenin from 6′-hydroxychalcone. RQPCR analysis showed that CHI activity correlated with changes in transcription level of the CHI gene, GbCHI activity was also positively correlated with total flavonoid levels in ginkgo leaves, suggesting CHI as a key gene regulating flavonoid accumulation in ginkgo leaves.

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Abbreviations

bp:

Base pair

HPLC:

High performance liquid chromatography

IPTG:

Isopropyl β-d-thiogalactoside, C9H18O5S

PCR:

Polymerase chain reaction

RACE:

Rapid amplification of cDNA ends

RQPCR:

Real-time quantitative PCR

RT-PCR:

Reverse transcriptase polymerase chain reaction

S.D.:

Standard deviation

SDS-PAGE:

Sodium dodecyl sulfate polyacrylamide gel electrophoresis

UV:

Ultraviolet

References

  • Abe H, Yamaguchi-Shinozaki K, Urao T, Iwasaki T, Hosokawa D, Shinozaki K (1997) Role of Arabidopsis MYC and MYB homologs in drought-and abscisic acid-regulated gene expression. Plant Cell 9:1859–1868

    Article  CAS  PubMed  Google Scholar 

  • Ardi R, Kobiler I, Jacoby B, Keen NT, Prusky D (1998) Involvement of epicatechin biosynthesis in the activation of the mechanism of resistance of avocado fruits to Colletotrichum gloeosporioides. Physiol Mol Plant Pathol 53:269–285

    Article  CAS  Google Scholar 

  • Awad MA, Wagenmakers PS, de Jager A (2001) Effects of light on flavonoid and chlorogenic acid levels in the skin of ‘Jonagold’ apples. Sci Hortic 88:289–298

    Article  CAS  Google Scholar 

  • Bate N, Twell D (1998) Functional architecture of a late pollen promoter: pollen-specific transcription is developmentally regulated by multiple stage-specific and co-dependent activator elements. Plant Mol Biol 37:859–869

    Article  CAS  PubMed  Google Scholar 

  • Bednar RA, Hadcock JR (1988) Purification and characterization of chalcone isomerase from soybeans. J Biol Chem 263:9582–9588

    CAS  PubMed  Google Scholar 

  • Bieza K, Lois R (2001) An Arabidopsis mutant tolerant to lethal ultraviolet-B levels shows constitutively elevated accumulation of flavonoids and other phenolics. Plant Physiol 126:1105–1115

    Article  CAS  PubMed  Google Scholar 

  • Boyle B, Brisson N (2001) Repression of the defense gene PR-10a by the single-stranded DNA binding protein SEBF. Plant Cell 13:2525–2537

    Article  CAS  PubMed  Google Scholar 

  • Cai G, Guo Y, Yao H, Chen S, Zhou T (2008) Impacts of cycocel and gibberellin on the biomass and flavonoid production in Scutellaria baicalensis Georgi. Chin Agric Sci Bull 24:213–217

    Google Scholar 

  • Carrier D, Cosentino G, Neufeld R, Rho D, Weber M, Archambault J (1990) Nutritional and hormonal requirements of Ginkgo biloba embryo-derived callus and suspension cell culture. Plant Cell Rep 8:635–638

    Article  CAS  Google Scholar 

  • Cheng SY (2001) Studies on the main facrtors influencing flavonoid formation and its regulation in Ginkgo biloba leaf. Dissertation, Shandong Agricultural University

  • Cheng SY, Gu MR, Shu HR (2000) Advances in research on flavonoids in Ginkgo biloba leaf. Scientia Silvae Sinicae 36:110–115

    Google Scholar 

  • Cheng SY, Wang Y, Fei YJ, Zhu GC (2004a) Studies on the effects of different treatments on flavonoids contents in Ginkgo biloba leaves and their regulating mechanism. J Fruit Sci 21:116–119

    Google Scholar 

  • Cheng SY, Wang Y, Li JK, Fei YJ, Zhu GC (2004b) Study on the relationship between the endogenous hormones and flavonoids. Scientia Silvae Sinicae 40:45–49

    CAS  Google Scholar 

  • Cheng SY, Xu F, Wang Y (2009) Advances in the study of flavonoids in Ginkgo biloba leaves. J Med Plants Res 3:1248–1252

    CAS  Google Scholar 

  • Diamond BJ, Shiflett SC, Feiwel N, Matheis RJ, Noskin O, Richards JA, Schoenberger NE (2000) Ginkgo biloba extract: mechanisms and clinical indications. Arch Phys Med Rehabil 81:668–678

    CAS  PubMed  Google Scholar 

  • Dixon RA, Blyden ER, Robbins MP, Van Tunen AJ, Mol JN (1988) Comparative biochemistry of chalcone isomerases. Phytochemistry 27:2801–2808

    Article  CAS  Google Scholar 

  • Druka A, Kudrna D, Rostoks N, Brueggeman R, von Wettstein D, Kleinhofs A (2003) Chalcone isomerase gene from rice (Oryza sativa) and barley (Hordeum vulgare): physical, genetic and mutation mapping. Gene 302:171–178

    Article  CAS  PubMed  Google Scholar 

  • El-Kereamy A, Chervin C, Roustan JP, Cheynier V, Souquet JM, Moutounet M, Raynal J, Ford C, Latché A, Pech JC (2003) Exogenous ethylene stimulates the long-term expression of genes related to anthocyanin biosynthesis in grape berries. Physiol Plant 119:175–182

    Article  CAS  Google Scholar 

  • Fouché S, Dubery I (1994) Chalcone isomerase from Citrus sinensis: purification and characterization. Phytochemistry 37:127–132

    Article  Google Scholar 

  • Gensheimer M, Mushegian A (2004) Chalcone isomerase family and fold: no longer unique to plants. Protein Sci 13:540–544

    Article  CAS  PubMed  Google Scholar 

  • Guiltinan M, Marcotte W Jr, Quatrano R (1990) A plant leucine zipper protein that recognizes an abscisic acid response element. Science 250:267–271

    Article  CAS  PubMed  Google Scholar 

  • Itzhaki H, Maxson JM, Woodson WR (1994) An ethylene-responsive enhancer element is involved in the senescence-related expression of the carnation glutathione-S-transferase (GST1) gene. PNAS 91:8925–8929

    Article  CAS  PubMed  Google Scholar 

  • Jaakola L, Maatta K, Pirttila A, Torronen R, Karenlampi S, Hohtola A (2002) Expression of genes involved in anthocyanin biosynthesis in relation to anthocyanin, proanthocyanidin, and flavonol levels during bilberry fruit development. Plant Physiol 130:729–739

    Article  CAS  PubMed  Google Scholar 

  • Jansson S, Meyer-Gauen G, Cerff R, Martin W (1994) Nucleotide distribution in gymnosperm nuclear sequences suggests a model for GC-content change in land-plant nuclear genomes. J Mol Evol 39:34–46

    Article  PubMed  Google Scholar 

  • Jez JM, Bowman ME, Dixon RA, Noel JP (2000) Structure and mechanism of the evolutionarily unique plant enzyme chalcone isomerase. Nat Struct Biol 7:786–791

    Article  CAS  PubMed  Google Scholar 

  • Kimura Y, Aoki T, Si A (2001) Chalcone isomerase isozymes with different substrate specificities towards 6-hydroxy- and 6-deoxychalcones in cultured cells of Glycyrrhiza echinata, a leguminous plant producing 5-deoxyflavonoids. Plant Cell Physiol 42:1169–1173

    Article  CAS  PubMed  Google Scholar 

  • Koes R, Verweij W, Quattrocchio F (2005) Flavonoids: a colorful model for the regulation and evolution of biochemical pathways. Trends Plant Sci 10:236–242

    Article  CAS  PubMed  Google Scholar 

  • Kuhn B, Forkmann G, Seyffert W (1978) Genetic control of chalcone-flavanone isomerase activity in Callistephus chinensis. Planta 138:199–203

    Article  CAS  Google Scholar 

  • Kush A, Goyvaerts E, Chye ML, Chua NH (1990) Laticifer-specific gene expression in Hevea brasiliensis (rubber tree). PNAS 87:1787–1790

    Article  CAS  PubMed  Google Scholar 

  • Lescot M, Déhais P, Thijs G, Marchal K, Moreau Y, Vande Peer Y, Rouzé P, Rombauts S (2002) PlantCARE, a database of plant cis-acting regulatory elements and a portal to tools for in silico analysis of promoter sequences. Nucl Acids Res 30:325–327

    Article  CAS  PubMed  Google Scholar 

  • Li J, Ou-Lee TM, Raba R, Amundson RG, Last RL (1993) Arabidopsis flavonoid mutants are hypersensitive to UV-B irradiation. Plant Cell 5:171–179

    Article  CAS  PubMed  Google Scholar 

  • Li F, Jin Z, Qu W, Zhao D, Ma F (2006) Cloning of a cDNA encoding the Saussurea medusa chalcone isomerase and its expression in transgenic tobacco. Plant Physiol Biochem 44:455–461

    Article  CAS  PubMed  Google Scholar 

  • Lopez-Molina L, Chua NH (2000) A null mutation in a bZIP factor confers ABA-insensitivity in Arabidopsis thaliana. Plant Cell Physiol 41:541–547

    CAS  PubMed  Google Scholar 

  • McKhann HI, Hirsch AM (1994) Isolation of chalcone synthase and chalcone isomerase cDNAs from alfalfa (Medicago sativa L.): highest transcript levels occur in young roots and root tips. Plant Mol Biol 24:767–777

    Article  CAS  PubMed  Google Scholar 

  • Mehdy M, Lamb C (1987) Chalcone isomerase cDNA cloning and mRNA induction by fungal elicitor, wounding and infection. EMBO J 6:1527–1533

    CAS  PubMed  Google Scholar 

  • Mol J, Grotewold E, Koes R (1998) How genes paint flowers and seeds. Trends Plant Sci 3:212–217

    Article  Google Scholar 

  • Moustafa E, Wong E (1967) Purification and properties of chalcone-flavanone isomerase from soya bean seed. Phytochemistry 6:625–632

    Article  CAS  Google Scholar 

  • Muir S, Collins G, Robinson S, Hughes S, Bovy A, De Vos C, van Tunen A, Verhoeyen M (2001) Overexpression of petunia chalcone isomerase in tomato results in fruit containing increased levels of flavonols. Nat Biotechnol 19:470–474

    Article  CAS  PubMed  Google Scholar 

  • Mundy J, Yamaguchi-Shinozaki K, Chua N (1990) Nuclear proteins bind conserved elements in the abscisic acid-responsive promoter of a rice rab gene. PNAS 87:1406–1410

    Article  CAS  PubMed  Google Scholar 

  • Oken BS, Storzbach DM, Kaye JA (1998) The efficacy of Ginkgo biloba on cognitive function in Alzheimer disease. Arch Neurol 55:1409–1415

    Article  CAS  PubMed  Google Scholar 

  • Park H, Kim M, Kang Y, Jeon J, Yoo J, Kim M, Park C, Jeong J, Moon B, Lee J (2004) Pathogen-and NaCl-induced expression of the SCaM-4 promoter is mediated in part by a GT-1 box that interacts with a GT-1-like transcription factor. Plant Physiol 135:2150–2161

    Article  CAS  PubMed  Google Scholar 

  • Piechulla B, Merforth N, Rudolph B (1998) Identification of tomato Lhc promoter regions necessary for circadian expression. Plant Mol Biol 38:655–662

    Article  CAS  PubMed  Google Scholar 

  • Rawat R, Xu ZF, Yao KM, Chye ML (2005) Identification of cis-elements for ethylene and circadian regulation of the Solanum melongena gene encoding cysteine proteinase. Plant Mol Biol 57:629–643

    Article  CAS  PubMed  Google Scholar 

  • Saure MC (1990) External control of anthocyanin formation in apple. Sci Hortic 42:181–218

    Article  CAS  Google Scholar 

  • Shimada N, Aoki T, Sato S, Nakamura Y, Tabata S, Ayabe S (2003) A cluster of genes encodes the two types of chalcone isomerase involved in the biosynthesis of general flavonoids and legume-specific 5-deoxy (iso) flavonoids in Lotus japonicus. Plant Physiol 131:941–951

    Article  CAS  PubMed  Google Scholar 

  • Shirley BW, Kubasek WL, Storz G, Bruggemann E, Koornneef M, Ausubel FM, Goodman HM (1995) Analysis of Arabidopsis mutants deficient in flavonoid biosynthesis. Plant J 8:659–671

    Article  CAS  PubMed  Google Scholar 

  • Smith JV, Luo Y (2004) Studies on molecular mechanisms of Ginkgo biloba extract. Appl Microbiol Biotechnol 64:465–472

    Article  CAS  PubMed  Google Scholar 

  • Solano R, Nieto C, Avila J, Canas L, Diaz I, Paz-Ares J (1995) Dual DNA binding specificity of a petal epidermis-specific MYB transcription factor (MYB. Ph3) from Petunia hybrida. EMBO J 14:1773–1784

    CAS  PubMed  Google Scholar 

  • Straub P, Shen Q, Ho T (1994) Structure and promoter analysis of an ABA-and stress-regulated barley gene, HVA1. Plant Mol Biol 26:617–630

    Article  CAS  PubMed  Google Scholar 

  • Sutoh K, Yamauchi D (2003) Two cis-acting elements necessary and sufficient for gibberellin-upregulated proteinase expression in rice seeds. Plant J 34:635–645

    Article  CAS  PubMed  Google Scholar 

  • Tamura K, Dudley J, Nei M, Kumar S (2007) MEGA4: molecular evolutionary genetics analysis (MEGA) software version 4.0. Mol Biol Evol 24:1596–1599

    Article  CAS  PubMed  Google Scholar 

  • van Beek TA (2002) Chemical analysis of Ginkgo biloba leaves and extracts. J Chromatogr A 967:21–55

    Article  PubMed  Google Scholar 

  • van Beek T, Montoro P (2009) Chemical analysis and quality control of Ginkgo biloba leaves, extracts, and phytopharmaceuticals. J Chromatogr A 1216:2002–2032

    Article  PubMed  Google Scholar 

  • Van Tunen AJ, Koes RE, Spelt CE, Van der Krol AR, Stuitje AR, Mol JN (1988) Cloning of the two chalcone flavanone isomerase genes from Petunia hybrida: coordinate, light-regulated and differential expression of flavonoid genes. EMBO J 7:1257–1263

    PubMed  Google Scholar 

  • Von Wettstein D, Gough S, Kannangara CG (1995) Chlorophyll biosynthesis. Plant Cell 7:1039–1057

    Article  Google Scholar 

  • Winkel-Shirley B (2002) Biosynthesis of flavonoids and effects of stress. Curr Opin Plant Biol 5:218–223

    Article  CAS  PubMed  Google Scholar 

  • Xu F (2008) Cloning and expression of GbPAL and GbANS genes and effect of ALA on the content of flavonoids in Ginkgo biloba. Dissertation, Shandong Agriculture University

  • Xu F, Cheng SY, Cheng SH, Wang Y, Du HW (2007) Time course of expression of chalcone synthase gene in Ginkgo biloba. J Plant Physiol Mol Biol 33:309–317

    CAS  Google Scholar 

  • Xu F, Cai R, Cheng SY, Du HW, Wang Y, Cheng SH (2008a) Molecular cloning, characterization and expression of phenylalanine ammonia-lyase gene from Ginkgo biloba. Afr J Biotechnol 7:721–729

    Google Scholar 

  • Xu F, Cheng H, Cai R, Li LL, Chang J, Zhu J, Zhang FX, Chen LJ, Wang Y, Cheng SH (2008b) Molecular cloning and function analysis of an anthocyanidin synthase gene from Ginkgo biloba, and its expression in abiotic stress responses. Mol Cells 26:536–547

    CAS  PubMed  Google Scholar 

  • Yamagata H, Yonesu K, Hirata A, Aizono Y (2002) TGTCACA motif is a novel cis-regulatory enhancer element involved in fruit-specific expression of thecucumisin gene. J Biol Chem 277:11582–11590

    Article  CAS  PubMed  Google Scholar 

  • Yoshioka S, Taniguchi F, Miura K, Inoue T, Yamano T, Fukuzawa H (2004) The novel Myb transcription factor LCR1 regulates the CO2-responsive gene Cah1, encoding a periplasmic carbonic anhydrase in Chlamydomonas reinhardtii. Plant Cell 16:1466–1477

    Article  CAS  PubMed  Google Scholar 

  • Zhang H, Liu J, Lu H, Gao S (2009) Enhanced flavonoid production in hairy root cultures of Glycyrrhiza uralensis Fisch by combining the over-expression of chalcone isomerase gene with the elicitation treatment. Plant Cell Rep 28:1205–1213

    Article  CAS  PubMed  Google Scholar 

  • Zhou D (1999) Regulatory mechanism of plant gene transcription by GT-elements and GT-factors. Trends Plant Sci 4:210–214

    Article  PubMed  Google Scholar 

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Acknowledgments

This work was supported by the Natural Science Foundation of China (30971974), the Program for New Century Excellent Talents in University (NCET-04-0746), and University–industry Cooperation Fund of Hubei Educational Office (CXY2009B009).

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Correspondence to Shuiyuan Cheng.

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Communicated by C. Quiros.

First two authors contributed equally to this work.

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Cheng, H., Li, L., Cheng, S. et al. Molecular cloning and function assay of a chalcone isomerase gene (GbCHI) from Ginkgo biloba . Plant Cell Rep 30, 49–62 (2011). https://doi.org/10.1007/s00299-010-0943-4

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  • DOI: https://doi.org/10.1007/s00299-010-0943-4

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