Skip to main content
Log in

The molecular clock ticks regularly in muroid rodents and hamsters

  • Published:
Journal of Molecular Evolution Aims and scope Submit manuscript

Summary

Extensive DNA sequence data are used to compare the rates of nucleotide substitution in the mouse, rat, and hamster lineages. A relative rate test using hamster sequences as references shows that the rates of synonymous and nonsynonymous substitution in the mouse and rat lineages are nearly equal and a test using human sequences as references shows that the rates in the mouse, rat, and hamster lineages are also nearly equal. Under the assumptions that the guinea pig lineage and the myomorph (mouse, rat, and hamster) lineage diverged 70–100 million years (Myr) ago and that the rate of nucleotide substitution has been constant in all these lineages since their divergence, the date of the mouse-rat split is estimated to be between 20 and 29 Myr ago, which is considerably older than the date (∼ 12 Myr) suggested by available rodent fossils and considerably younger than the date (∼ 35 Myr) suggested by Wilson and colleagues. The murid-hamster split is estimated to be 1.6 times older than the mouse-rat split.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Institutional subscriptions

Similar content being viewed by others

References

  • Britten RJ (1986) Rates of DNA sequence evolution differ between taxonomic groups. Science 231:1393–1398

    Google Scholar 

  • Brown SJ, Jewell A, Maki CG, Roufa DJ (1990) A cDNA encoding human ribosomal protein S24. Gene 91:293–296

    Google Scholar 

  • Brownell E (1983) DNA/DNA hybridization studies of muroid rodents: symmetry and rates of molecular evolution. Evolution 37:1034–1051

    Google Scholar 

  • Catzeflis FM, Sheldon FH, Ahlquist JA, Sibley CG (1987) DNA/DNA hybridization evidence of the rapid rate of muroid rodent DNA evolution. Mol Biol Evol 4:242–253

    Google Scholar 

  • Dowton SB, McGrew SD (1990) Rat serum amyloid P component: analysis of cDNA sequence and gene expression. Biochem J 270:553–556

    Google Scholar 

  • Easteal S (1990) The pattern of mammalian evolution and the relative rate of molecular evolution. Genetics 124:165–173

    Google Scholar 

  • Easteal S (1991) The relative rate of cDNA evolution in primates. Mol Biol Evol 8:115–127

    Google Scholar 

  • Flynn LJ, Jacobs LL, Lindsay EH (1985) Problems in muroid phylogeny: Relationships to other rodents and origin of major groups. In: Luckett WP, Hartenberger J-L (eds) Evolutionary relationships among rodents. Plenum, New York, pp 589–616

    Google Scholar 

  • Goodman M (1961) The role of immunochemical differences in the phyletic development of human behavior. Human Biol 33: 131–162

    Google Scholar 

  • Grauer D, Hide WA, Li W-H (1991) Is the guinea-pig a rodent? Nature 351:649–652

    Google Scholar 

  • Jacobs LL, Pilbeam D (1980) Of mice and men: Fossil-based divergence dates and molecular “clocks”. J Human Evol 9: 551–555

    Google Scholar 

  • Jaworski CJ, Piatigorsky J (1989) A pseudo-exon in the functional human αA-crystallin gene. Nature 337:752–754

    Google Scholar 

  • Kimura M (1968) Evolutionary rate at the molecular level. Nature 217:624–626

    Google Scholar 

  • Kimura M (1983) The neutral theory of molecular evolution. Cambridge University Press, Cambridge, England

    Google Scholar 

  • King JL, Jukes TH (1969) Non-Darwinian evolution. Science 164:788–798

    Google Scholar 

  • Kohne DE, Chiscon JA, Hoyer BH (1972) Evolution of primate DNA sequences. J Hum Evol 1:627–644

    Google Scholar 

  • Koop BF, Goodman M, Xu P, Chan K, Slightom JL (1986) Primate η-globin DNA sequences and man's place among the great apes. Nature 319:234–238

    Google Scholar 

  • Kuo CF, Darnell Jr JE (1989) Mouse glutamine synthetase is encoded by a single gene that can be expressed in a localized fashion. J Mol Biol 208:45–56

    Google Scholar 

  • Laird CD, McConaughy BL, McCarthy BJ (1969) Rate of fixation of nucleotide substitutions in evolution. Nature 224:149–154

    Google Scholar 

  • Li W-H, Tanimura M (1987) The molecular clock runs more slowly in man than in apes and monkeys. Nature 326:93–96

    Google Scholar 

  • Li W-H, Tanimura M, Sharp PM (1987) An evaluation of the molecular clock hypothesis using mammalian DNA sequences. J Mol Evol 25:330–342

    Google Scholar 

  • Li W-H, Wu C-I, Luo C-C (1985) A new method for estimating synonymous and nonsynonymous rates of nucleotide substitution considering the relative likelihood of nucleotide and codon changes. Mol Biol Evol 2:150–174

    Google Scholar 

  • Li W-H, Gouy M, Sharp PM, O'hUigin C, Yang Y-W (1990) Molecular phylogeny of Rodentia, Lagomorpha, Primates, Artidactyla, and Carnivora and molecular clocks. Proc Natl Acad Sci USA 87:6703–6707

    Google Scholar 

  • Li W-H, Hide WA, Zharkikh A (1992) The molecular taxonomy and evolution of the guinea pig. J Heredity, in press

  • Luckett WP, Hartenberger J-L (eds) (1985) Evolutionary relationships among rodents. Plenum, New York

    Google Scholar 

  • Mouchiroud D, Gautier C, Bernardi G (1988) The compositional distribution of coding sequences and DNA molecules in humans and murids. J Mol Evol 27:311–320

    Google Scholar 

  • Pesole G, Bozzetti MP, Lanave C, Preparata G, Saccone C (1991) Glutamine synthetase gene evolution: a good molecular clock. Proc Natl Acad Sci USA 88:522–526

    Google Scholar 

  • Saccone C, Pesole G, Preparata G (1989) DNA microenvironments and the molecular clock. J Mol Evol 29:407–411

    Google Scholar 

  • Saccone C, Pesole G, Sbisá E (1991) The main regulatory region of mammalian mithochondrial DNA: structure-function model and evolutionary pattern. J Mol Evol 33:83–91

    Google Scholar 

  • Saltzman AG, Morse B, Whitman MM, Ivenshchenko Y, Jaye M, Felder S (1991) Cloning of the human serotonin 5-HT2 and 5-HTIC receptor subtypes. Biochem Biophy Res Comm 181: 1469–1478

    Google Scholar 

  • Seino S, Bell GI, Li W-H (1992) Sequences of primate insulin genes support the hypothesis of a slower rate of molecular evolution in humans and apes than in monkeys. Mol Biol Evol 9:193–203

    Google Scholar 

  • Wilson AC, Carlson SS, White TJ (1977) Biochemical evolution. Ann Rev Biochem 46:573–639

    Google Scholar 

  • Wu C-I, Li W-H (1985) Evidence for higher rates of nucleotide substitution in rodents than in man. Proc Natl Acad Sci USA 82:1741–1745

    CAS  PubMed  Google Scholar 

  • Zuckerkandl E, Pauling L (1965) Evolutionary divergence and convergence in proteins. In: Bryson V, Vogel nHJ (eds) Evolving genes and proteins. Academic Press, New York, pp 97–166

    Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Rights and permissions

Reprints and permissions

About this article

Cite this article

O'hUigin, C., Li, WH. The molecular clock ticks regularly in muroid rodents and hamsters. J Mol Evol 35, 377–384 (1992). https://doi.org/10.1007/BF00171816

Download citation

  • Issue Date:

  • DOI: https://doi.org/10.1007/BF00171816

Key words

Navigation