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SNP Arrays for Species Identification in Salmonids

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Book cover Marine Genomics

Part of the book series: Methods in Molecular Biology ((MIMB,volume 1452))

Abstract

The use of SNP genotyping microarrays, developed in one species to analyze a closely related species for which genomic sequence information is scarce, enables the rapid development of a genomic resource (SNP information) without the need to develop new species-specific markers. Using large numbers of microarray SNPs offers the best chance to detect informative markers in nontarget species, markers that can very often be assayed using a lower throughput platform as is described in this paper.

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Acknowledgements

This work was partially funded from statutory topic IV.1. in the Institute of Oceanology PAS and project No. 397/N-cGRASP/2009/0 of the Ministry of Science and Higher Education in Poland to R.W.

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Authors and Affiliations

  1. Institute of Oceanology, Polish Academy of Sciences, Powstancow Warszawy 55, 81-712, Sopot, Poland

    Roman Wenne & Agata Drywa

  2. Centre for Integrative Genetics (CIGENE), Department of Animal and Aquacultural Sciences, IHA, Norwegian University of Life Sciences, NMBU, 1432, Ås, Norway

    Matthew Kent, Kristil Kindem Sundsaasen & Sigbjørn Lien

Authors
  1. Roman Wenne
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  2. Agata Drywa
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  3. Matthew Kent
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  4. Kristil Kindem Sundsaasen
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  5. Sigbjørn Lien
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Corresponding author

Correspondence to Roman Wenne .

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Editors and Affiliations

  1. Department of Marine Sciences, University of Gothenburg, Gothenburg, Sweden

    Sarah J. Bourlat

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Wenne, R., Drywa, A., Kent, M., Sundsaasen, K.K., Lien, S. (2016). SNP Arrays for Species Identification in Salmonids. In: Bourlat, S. (eds) Marine Genomics. Methods in Molecular Biology, vol 1452. Humana Press, New York, NY. https://doi.org/10.1007/978-1-4939-3774-5_6

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  • DOI: https://doi.org/10.1007/978-1-4939-3774-5_6

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  • Publisher Name: Humana Press, New York, NY

  • Print ISBN: 978-1-4939-3772-1

  • Online ISBN: 978-1-4939-3774-5

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